RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 NISCHQ9Y2I1 1504 aa41.3■■■■■ 4.2
PCDHB2-202ENST00000622947 CCDC180Q9P1Z9 1646 aa35.78■■■■□ 3.32
PCDHB2-202ENST00000622947 ZCCHC6Q5VYS8 1495 aaKnown RBP34.74■■■■□ 3.15
PCDHB2-202ENST00000622947 DCAF8L2P0C7V8 631 aa34.14■■■■□ 3.06
PCDHB2-202ENST00000622947 SHROOM4Q9ULL8 1493 aa34.04■■■■□ 3.04
PCDHB2-202ENST00000622947 DCAF1Q9Y4B6 1507 aa34.03■■■■□ 3.04
PCDHB2-202ENST00000622947 ABCC9O60706 1549 aa33.8■■■■□ 3
PCDHB2-202ENST00000622947 MYO15BQ96JP2 1530 aa33.5■■■□□ 2.95
PCDHB2-202ENST00000622947 NACADO15069 1562 aa33.28■■■□□ 2.92
PCDHB2-202ENST00000622947 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
PCDHB2-202ENST00000622947 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
PCDHB2-202ENST00000622947 SUPT5HO00267 1087 aaKnown RBP32.83■■■□□ 2.85
PCDHB2-202ENST00000622947 UNC13AQ9UPW8 1703 aa32.47■■■□□ 2.79
PCDHB2-202ENST00000622947 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
PCDHB2-202ENST00000622947 RSF1Q96T23 1441 aaPredicted RBP32.19■■■□□ 2.74
PCDHB2-202ENST00000622947 BICRAQ9NZM4 1560 aa32.11■■■□□ 2.73
PCDHB2-202ENST00000622947 MROH2BQ7Z745 1585 aa32■■■□□ 2.71
PCDHB2-202ENST00000622947 PABPN1Q86U42 306 aaKnown RBP eCLIP31.99■■■□□ 2.71
PCDHB2-202ENST00000622947 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
PCDHB2-202ENST00000622947 WIZO95785 1651 aa31.77■■■□□ 2.68
PCDHB2-202ENST00000622947 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
PCDHB2-202ENST00000622947 CHIC1Q5VXU3 224 aa31.54■■■□□ 2.64
PCDHB2-202ENST00000622947 TOP2AP11388 1531 aaKnown RBP31.31■■■□□ 2.6
PCDHB2-202ENST00000622947 PEG3Q9GZU2 1588 aa31.25■■■□□ 2.59
PCDHB2-202ENST00000622947 ATAD2BQ9ULI0 1458 aa31.12■■■□□ 2.57
PCDHB2-202ENST00000622947 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
PCDHB2-202ENST00000622947 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
PCDHB2-202ENST00000622947 EIF4G1Q04637 1599 aaKnown RBP31.06■■■□□ 2.56
PCDHB2-202ENST00000622947 BAZ1BQ9UIG0 1483 aaKnown RBP30.92■■■□□ 2.54
PCDHB2-202ENST00000622947 NCAPD3P42695 1498 aa30.77■■■□□ 2.52
PCDHB2-202ENST00000622947 TRIM41Q8WV44 630 aa30.75■■■□□ 2.51
PCDHB2-202ENST00000622947 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
PCDHB2-202ENST00000622947 ABCC8Q09428 1581 aa30.58■■■□□ 2.49
PCDHB2-202ENST00000622947 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
PCDHB2-202ENST00000622947 LOC105371045A0A1W2PR82 267 aa30.45■■■□□ 2.46
PCDHB2-202ENST00000622947 FAM9AQ8IZU1 332 aaPredicted RBP30.32■■■□□ 2.45
PCDHB2-202ENST00000622947 WRNQ14191 1432 aaPredicted RBP eCLIP30.23■■■□□ 2.43
PCDHB2-202ENST00000622947 CFTRP13569 1480 aa30.18■■■□□ 2.42
PCDHB2-202ENST00000622947 SYNJ1O43426 1573 aa30.18■■■□□ 2.42
PCDHB2-202ENST00000622947 SOGA1O94964 1423 aa30.06■■■□□ 2.4
PCDHB2-202ENST00000622947 CADPSQ9ULU8 1353 aa30.02■■■□□ 2.4
PCDHB2-202ENST00000622947 PRDM2Q13029 1718 aa30■■■□□ 2.39
PCDHB2-202ENST00000622947 RUSC2Q8N2Y8 1516 aa29.98■■■□□ 2.39
PCDHB2-202ENST00000622947 EHMT2Q96KQ7 1210 aa29.98■■■□□ 2.39
PCDHB2-202ENST00000622947 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
PCDHB2-202ENST00000622947 TOP2BQ02880 1626 aa29.95■■■□□ 2.39
PCDHB2-202ENST00000622947 BIVM-ERCC5R4GMW8 1640 aa29.91■■■□□ 2.38
PCDHB2-202ENST00000622947 CUX1P39880 1505 aa29.88■■■□□ 2.37
PCDHB2-202ENST00000622947 NESP48681 1621 aa29.81■■■□□ 2.36
PCDHB2-202ENST00000622947 EEA1Q15075 1411 aa29.8■■■□□ 2.36
PCDHB2-202ENST00000622947 CSRNP3Q8WYN3 585 aa29.76■■■□□ 2.35
PCDHB2-202ENST00000622947 FANCD2Q9BXW9 1451 aa29.7■■■□□ 2.35
PCDHB2-202ENST00000622947 LAMC3Q9Y6N6 1575 aa29.64■■■□□ 2.34
PCDHB2-202ENST00000622947 KIF21BO75037 1637 aa29.49■■■□□ 2.31
PCDHB2-202ENST00000622947 GOLGA3Q08378 1498 aa29.49■■■□□ 2.31
PCDHB2-202ENST00000622947 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
PCDHB2-202ENST00000622947 TNIKQ9UKE5 1360 aa29.46■■■□□ 2.31
PCDHB2-202ENST00000622947 CEP164Q9UPV0 1460 aa29.46■■■□□ 2.31
PCDHB2-202ENST00000622947 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
PCDHB2-202ENST00000622947 TOPBP1Q92547 1522 aa29.42■■■□□ 2.3
PCDHB2-202ENST00000622947 UBTFP17480 764 aaKnown RBP29.41■■■□□ 2.3
PCDHB2-202ENST00000622947 KIF27Q86VH2 1401 aa29.4■■■□□ 2.3
PCDHB2-202ENST00000622947 KIF21AQ7Z4S6 1674 aa29.39■■■□□ 2.3
PCDHB2-202ENST00000622947 PDS5BQ9NTI5 1447 aa29.39■■■□□ 2.3
PCDHB2-202ENST00000622947 RAPGEF2Q9Y4G8 1499 aa29.39■■■□□ 2.3
PCDHB2-202ENST00000622947 CEP162Q5TB80 1403 aa29.37■■■□□ 2.29
PCDHB2-202ENST00000622947 URB2Q14146 1524 aaKnown RBP29.37■■■□□ 2.29
PCDHB2-202ENST00000622947 CUX2O14529 1486 aa29.33■■■□□ 2.29
PCDHB2-202ENST00000622947 PRXQ9BXM0 1461 aa29.33■■■□□ 2.29
PCDHB2-202ENST00000622947 POLA1P09884 1462 aaPredicted RBP29.31■■■□□ 2.28
PCDHB2-202ENST00000622947 RAD54L2Q9Y4B4 1467 aa29.28■■■□□ 2.28
PCDHB2-202ENST00000622947 PCGF6Q9BYE7 350 aa29.24■■■□□ 2.27
PCDHB2-202ENST00000622947 ERICH3Q5RHP9 1530 aa29.22■■■□□ 2.27
PCDHB2-202ENST00000622947 IGF1RP08069 1367 aa29.21■■■□□ 2.27
PCDHB2-202ENST00000622947 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
PCDHB2-202ENST00000622947 WDR97A6NE52 1622 aa29.1■■■□□ 2.25
PCDHB2-202ENST00000622947 HRCP23327 699 aa29.08■■■□□ 2.25
PCDHB2-202ENST00000622947 CLIP1P30622 1438 aa29.07■■■□□ 2.24
PCDHB2-202ENST00000622947 TRIM26Q12899 539 aaPredicted RBP29.06■■■□□ 2.24
PCDHB2-202ENST00000622947 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
PCDHB2-202ENST00000622947 PPARGC1BQ86YN6 1023 aaKnown RBP29.04■■■□□ 2.24
PCDHB2-202ENST00000622947 CARMIL1Q5VZK9 1371 aa29.02■■■□□ 2.24
PCDHB2-202ENST00000622947 RANGAP1P46060 587 aaPredicted RBP28.99■■■□□ 2.23
PCDHB2-202ENST00000622947 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
PCDHB2-202ENST00000622947 TDRD9Q8NDG6 1382 aaKnown RBP28.96■■■□□ 2.23
PCDHB2-202ENST00000622947 ABCA5Q8WWZ7 1642 aa28.95■■■□□ 2.23
PCDHB2-202ENST00000622947 WDR62O43379 1518 aa28.89■■■□□ 2.22
PCDHB2-202ENST00000622947 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
PCDHB2-202ENST00000622947 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
PCDHB2-202ENST00000622947 CUL7Q14999 1698 aa28.84■■■□□ 2.21
PCDHB2-202ENST00000622947 VPS8Q8N3P4 1428 aa28.83■■■□□ 2.21
PCDHB2-202ENST00000622947 ARAP1Q96P48 1450 aa28.81■■■□□ 2.2
PCDHB2-202ENST00000622947 THOC2Q8NI27 1593 aaKnown RBP28.79■■■□□ 2.2
PCDHB2-202ENST00000622947 PELP1Q8IZL8 1130 aaKnown RBP28.77■■■□□ 2.2
PCDHB2-202ENST00000622947 ARHGAP35Q9NRY4 1499 aa28.75■■■□□ 2.19
PCDHB2-202ENST00000622947 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.19
PCDHB2-202ENST00000622947 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
PCDHB2-202ENST00000622947 ZNF608Q9ULD9 1512 aaPredicted RBP28.7■■■□□ 2.19
PCDHB2-202ENST00000622947 PBRM1Q86U86 1689 aa28.7■■■□□ 2.19
PCDHB2-202ENST00000622947 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms