RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
SEH1L-208ENST00000590843 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
SEH1L-208ENST00000590843 FAM9AQ8IZU1 332 aaPredicted RBP19.5■□□□□ 0.71
SEH1L-208ENST00000590843 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
SEH1L-208ENST00000590843 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
SEH1L-208ENST00000590843 ABCC9O60706 1549 aa18.55■□□□□ 0.56
SEH1L-208ENST00000590843 APLP2Q06481 763 aa18.42■□□□□ 0.54
SEH1L-208ENST00000590843 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
SEH1L-208ENST00000590843 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
SEH1L-208ENST00000590843 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
SEH1L-208ENST00000590843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
SEH1L-208ENST00000590843 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
SEH1L-208ENST00000590843 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.43
SEH1L-208ENST00000590843 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
SEH1L-208ENST00000590843 RANGAP1P46060 587 aaPredicted RBP17.64■□□□□ 0.41
SEH1L-208ENST00000590843 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
SEH1L-208ENST00000590843 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
SEH1L-208ENST00000590843 FBLN2P98095 1184 aa17.61■□□□□ 0.41
SEH1L-208ENST00000590843 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
SEH1L-208ENST00000590843 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
SEH1L-208ENST00000590843 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
SEH1L-208ENST00000590843 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
SEH1L-208ENST00000590843 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
SEH1L-208ENST00000590843 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
SEH1L-208ENST00000590843 NACADO15069 1562 aa17.19■□□□□ 0.34
SEH1L-208ENST00000590843 CHIC1Q5VXU3 224 aa17.08■□□□□ 0.32
SEH1L-208ENST00000590843 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
SEH1L-208ENST00000590843 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
SEH1L-208ENST00000590843 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
SEH1L-208ENST00000590843 BCANQ96GW7 911 aa16.95■□□□□ 0.3
SEH1L-208ENST00000590843 AEBP2Q6ZN18 517 aaPredicted RBP16.8■□□□□ 0.28
SEH1L-208ENST00000590843 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
SEH1L-208ENST00000590843 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
SEH1L-208ENST00000590843 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
SEH1L-208ENST00000590843 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
SEH1L-208ENST00000590843 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
SEH1L-208ENST00000590843 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
SEH1L-208ENST00000590843 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
SEH1L-208ENST00000590843 ITGAEP38570 1179 aa16.63■□□□□ 0.25
SEH1L-208ENST00000590843 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
SEH1L-208ENST00000590843 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
SEH1L-208ENST00000590843 ZNF777Q9ULD5 760 aaPredicted RBP16.55■□□□□ 0.24
SEH1L-208ENST00000590843 FAM50AQ14320 339 aaKnown RBP16.55■□□□□ 0.24
SEH1L-208ENST00000590843 TRIM52Q96A61 297 aa16.55■□□□□ 0.24
SEH1L-208ENST00000590843 ARID3CA6NKF2 412 aa16.49■□□□□ 0.23
SEH1L-208ENST00000590843 P3H3Q8IVL6 736 aa16.45■□□□□ 0.22
SEH1L-208ENST00000590843 CCER1Q8TC90 406 aaPredicted RBP16.45■□□□□ 0.22
SEH1L-208ENST00000590843 PLEKHD1A6NEE1 506 aa16.44■□□□□ 0.22
SEH1L-208ENST00000590843 PCGF6Q9BYE7 350 aa16.44■□□□□ 0.22
SEH1L-208ENST00000590843 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
SEH1L-208ENST00000590843 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
SEH1L-208ENST00000590843 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
SEH1L-208ENST00000590843 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
SEH1L-208ENST00000590843 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
SEH1L-208ENST00000590843 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
SEH1L-208ENST00000590843 KCNH8Q96L42 1107 aa16.38■□□□□ 0.21
SEH1L-208ENST00000590843 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
SEH1L-208ENST00000590843 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
SEH1L-208ENST00000590843 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
SEH1L-208ENST00000590843 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
SEH1L-208ENST00000590843 NEFMP07197 916 aa16.34■□□□□ 0.21
SEH1L-208ENST00000590843 PPP1R15AO75807 674 aaPredicted RBP16.33■□□□□ 0.21
SEH1L-208ENST00000590843 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
SEH1L-208ENST00000590843 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
SEH1L-208ENST00000590843 HAP1P54257 671 aaPredicted RBP16.26■□□□□ 0.19
SEH1L-208ENST00000590843 HDGFP51858 240 aaKnown RBP16.26■□□□□ 0.19
SEH1L-208ENST00000590843 CARMIL2Q6F5E8 1435 aa16.25■□□□□ 0.19
SEH1L-208ENST00000590843 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
SEH1L-208ENST00000590843 ACIN1Q9UKV3 1341 aaKnown RBP16.2■□□□□ 0.18
SEH1L-208ENST00000590843 KIF27Q86VH2 1401 aa16.18■□□□□ 0.18
SEH1L-208ENST00000590843 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
SEH1L-208ENST00000590843 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
SEH1L-208ENST00000590843 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
SEH1L-208ENST00000590843 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
SEH1L-208ENST00000590843 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
SEH1L-208ENST00000590843 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
SEH1L-208ENST00000590843 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
SEH1L-208ENST00000590843 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
SEH1L-208ENST00000590843 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
SEH1L-208ENST00000590843 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
SEH1L-208ENST00000590843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.17
SEH1L-208ENST00000590843 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
SEH1L-208ENST00000590843 FOXD1Q16676 465 aa16.02■□□□□ 0.15
SEH1L-208ENST00000590843 SOGA1O94964 1423 aa16.01■□□□□ 0.15
SEH1L-208ENST00000590843 A0A0G2JS52 829 aa16■□□□□ 0.15
SEH1L-208ENST00000590843 EEA1Q15075 1411 aa16■□□□□ 0.15
SEH1L-208ENST00000590843 CLIP1P30622 1438 aa16■□□□□ 0.15
SEH1L-208ENST00000590843 MLECQ14165 292 aa15.98■□□□□ 0.15
SEH1L-208ENST00000590843 CFDP1Q9UEE9 299 aaPredicted RBP15.97■□□□□ 0.15
SEH1L-208ENST00000590843 KANK1Q14678 1352 aa15.97■□□□□ 0.15
SEH1L-208ENST00000590843 NEFLP07196 543 aa15.95■□□□□ 0.14
SEH1L-208ENST00000590843 MYT1Q01538 1121 aa15.95■□□□□ 0.14
SEH1L-208ENST00000590843 ZBTB47Q9UFB7 747 aaPredicted RBP15.93■□□□□ 0.14
SEH1L-208ENST00000590843 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
SEH1L-208ENST00000590843 EFCAB2Q5VUJ9 269 aa15.91■□□□□ 0.14
SEH1L-208ENST00000590843 CUX2O14529 1486 aa15.9■□□□□ 0.14
SEH1L-208ENST00000590843 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
SEH1L-208ENST00000590843 TRIM26Q12899 539 aaPredicted RBP15.86■□□□□ 0.13
SEH1L-208ENST00000590843 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
SEH1L-208ENST00000590843 CARMIL1Q5VZK9 1371 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms