Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.98■□□□□ 0.47
CTSDP07339 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.98■□□□□ 0.47
CTSDP07339 AC004987.1-201ENST00000428627 508 ntBASIC17.98■□□□□ 0.47
CTSDP07339 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.98■□□□□ 0.47
CTSDP07339 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.98■□□□□ 0.47
CTSDP07339 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.98■□□□□ 0.47
CTSDP07339 AC012354.3-201ENST00000623734 483 ntBASIC17.98■□□□□ 0.47
CTSDP07339 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CTSDP07339 AC005703.6-201ENST00000623265 1329 ntBASIC17.98■□□□□ 0.47
CTSDP07339 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTSDP07339 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTSDP07339 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTSDP07339 ATP5G2P3-201ENST00000429083 425 ntBASIC17.97■□□□□ 0.47
CTSDP07339 PVT1_1.1-201ENST00000615125 194 ntBASIC17.97■□□□□ 0.47
CTSDP07339 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.97■□□□□ 0.47
CTSDP07339 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTSDP07339 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTSDP07339 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.97■□□□□ 0.47
CTSDP07339 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.97■□□□□ 0.47
CTSDP07339 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CTSDP07339 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTSDP07339 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.97■□□□□ 0.47
CTSDP07339 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.97■□□□□ 0.47
CTSDP07339 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.96■□□□□ 0.47
CTSDP07339 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.96■□□□□ 0.47
CTSDP07339 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.96■□□□□ 0.47
CTSDP07339 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.96■□□□□ 0.47
CTSDP07339 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CTSDP07339 AC004687.1-201ENST00000579003 1625 ntBASIC17.96■□□□□ 0.47
CTSDP07339 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.96■□□□□ 0.47
CTSDP07339 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTSDP07339 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CTSDP07339 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.96■□□□□ 0.47
CTSDP07339 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.96■□□□□ 0.47
CTSDP07339 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CTSDP07339 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.95■□□□□ 0.46
CTSDP07339 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.95■□□□□ 0.46
CTSDP07339 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.95■□□□□ 0.46
CTSDP07339 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTSDP07339 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.94■□□□□ 0.46
CTSDP07339 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.94■□□□□ 0.46
CTSDP07339 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTSDP07339 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.94■□□□□ 0.46
CTSDP07339 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTSDP07339 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTSDP07339 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTSDP07339 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTSDP07339 TSPY13P-201ENST00000338964 914 ntBASIC17.94■□□□□ 0.46
CTSDP07339 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.94■□□□□ 0.46
CTSDP07339 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CTSDP07339 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.94■□□□□ 0.46
CTSDP07339 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CTSDP07339 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTSDP07339 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.94■□□□□ 0.46
CTSDP07339 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.93■□□□□ 0.46
CTSDP07339 LINC01521-201ENST00000504184 1943 ntBASIC17.93■□□□□ 0.46
CTSDP07339 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.93■□□□□ 0.46
CTSDP07339 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTSDP07339 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSDP07339 AF106564.1-201ENST00000607058 2553 ntBASIC17.92■□□□□ 0.46
CTSDP07339 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms