Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 SLC47A1P1-202ENST00000449666 945 ntBASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIMC1Q8NDZ2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 PBX2P1-201ENST00000493219 1291 ntBASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 AC135279.3-201ENST00000610945 1311 ntBASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIMC1Q8NDZ2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIMC1Q8NDZ2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 OR2I1P-207ENST00000453522 948 ntBASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 ESRRAP2-201ENST00000418437 1549 ntBASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.43■□□□□ 0.86
SIMC1Q8NDZ2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 AC106739.1-201ENST00000617035 715 ntBASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 AL031602.1-201ENST00000633169 911 ntBASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 AC137767.1-201ENST00000602918 1920 ntBASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIMC1Q8NDZ2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 AC127496.7-201ENST00000625110 1798 ntBASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms