Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL15A1P39059 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL15A1P39059 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL15A1P39059 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
COL15A1P39059 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
COL15A1P39059 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
COL15A1P39059 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL15A1P39059 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.83■■■□□ 2.05
COL15A1P39059 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.83■■■□□ 2.05
COL15A1P39059 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.82■■■□□ 2.04
COL15A1P39059 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
COL15A1P39059 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
COL15A1P39059 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.82■■■□□ 2.04
COL15A1P39059 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.82■■■□□ 2.04
COL15A1P39059 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
COL15A1P39059 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
COL15A1P39059 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC27.82■■■□□ 2.04
COL15A1P39059 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.82■■■□□ 2.04
COL15A1P39059 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.82■■■□□ 2.04
COL15A1P39059 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
COL15A1P39059 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.81■■■□□ 2.04
COL15A1P39059 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL15A1P39059 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.81■■■□□ 2.04
COL15A1P39059 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL15A1P39059 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL15A1P39059 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL15A1P39059 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
COL15A1P39059 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC27.81■■■□□ 2.04
COL15A1P39059 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL15A1P39059 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.8■■■□□ 2.04
COL15A1P39059 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL15A1P39059 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.8■■■□□ 2.04
COL15A1P39059 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.8■■■□□ 2.04
COL15A1P39059 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL15A1P39059 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.8■■■□□ 2.04
COL15A1P39059 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
COL15A1P39059 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
COL15A1P39059 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
COL15A1P39059 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.79■■■□□ 2.04
COL15A1P39059 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL15A1P39059 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL15A1P39059 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL15A1P39059 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.79■■■□□ 2.04
COL15A1P39059 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.79■■■□□ 2.04
COL15A1P39059 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
COL15A1P39059 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
COL15A1P39059 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL15A1P39059 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL15A1P39059 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.79■■■□□ 2.04
COL15A1P39059 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.79■■■□□ 2.04
COL15A1P39059 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
COL15A1P39059 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
COL15A1P39059 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.78■■■□□ 2.04
COL15A1P39059 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.78■■■□□ 2.04
COL15A1P39059 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
COL15A1P39059 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.78■■■□□ 2.04
COL15A1P39059 AL050303.2-201ENST00000619798 666 ntBASIC27.78■■■□□ 2.04
COL15A1P39059 ANOS2P-203ENST00000472227 1816 ntBASIC27.78■■■□□ 2.04
COL15A1P39059 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.78■■■□□ 2.04
COL15A1P39059 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL15A1P39059 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
COL15A1P39059 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
COL15A1P39059 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.77■■■□□ 2.04
COL15A1P39059 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
COL15A1P39059 AC005224.4-201ENST00000583262 1652 ntBASIC27.77■■■□□ 2.04
COL15A1P39059 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL15A1P39059 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL15A1P39059 GPX1P1-201ENST00000388829 606 ntBASIC27.76■■■□□ 2.03
COL15A1P39059 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL15A1P39059 KRT87P-202ENST00000534226 1464 ntBASIC27.76■■■□□ 2.03
COL15A1P39059 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL15A1P39059 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL15A1P39059 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
COL15A1P39059 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.75■■■□□ 2.03
COL15A1P39059 AC104187.1-201ENST00000607510 612 ntBASIC27.75■■■□□ 2.03
COL15A1P39059 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL15A1P39059 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.75■■■□□ 2.03
COL15A1P39059 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
COL15A1P39059 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL15A1P39059 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
COL15A1P39059 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
COL15A1P39059 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL15A1P39059 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL15A1P39059 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
COL15A1P39059 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL15A1P39059 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
COL15A1P39059 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.74■■■□□ 2.03
COL15A1P39059 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL15A1P39059 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.73■■■□□ 2.03
COL15A1P39059 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC27.73■■■□□ 2.03
COL15A1P39059 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL15A1P39059 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.73■■■□□ 2.03
COL15A1P39059 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
COL15A1P39059 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.73■■■□□ 2.03
COL15A1P39059 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL15A1P39059 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL15A1P39059 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
COL15A1P39059 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
COL15A1P39059 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
COL15A1P39059 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms