Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TBC1D3EA0A087X179 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D3EA0A087X179 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 AC016769.1-201ENST00000409132 1010 ntBASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D3EA0A087X179 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AP004607.4-201ENST00000530158 1459 ntBASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AC137761.2-201ENST00000561729 223 ntBASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AC145350.3-201ENST00000569033 163 ntBASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AC004854.2-201ENST00000608450 1441 ntBASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.71■■□□□ 1.07
TBC1D3EA0A087X179 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 KRT18P61-201ENST00000585825 1298 ntBASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D3EA0A087X179 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TBC1D3EA0A087X179 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TBC1D3EA0A087X179 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 LINC01960-201ENST00000563759 1884 ntBASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 AC079140.4-201ENST00000507448 529 ntBASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.67■■□□□ 1.06
TBC1D3EA0A087X179 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TBC1D3EA0A087X179 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TBC1D3EA0A087X179 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TBC1D3EA0A087X179 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.66■■□□□ 1.06
TBC1D3EA0A087X179 KRT19P1-201ENST00000405746 1186 ntBASIC21.66■■□□□ 1.06
TBC1D3EA0A087X179 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TBC1D3EA0A087X179 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms