Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TWNKQ96RR1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TWNKQ96RR1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.26■■□□□ 1.31
TWNKQ96RR1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TWNKQ96RR1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.25■■□□□ 1.31
TWNKQ96RR1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.25■■□□□ 1.31
TWNKQ96RR1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.25■■□□□ 1.31
TWNKQ96RR1 AC068587.7-201ENST00000641602 218 ntBASIC23.25■■□□□ 1.31
TWNKQ96RR1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.25■■□□□ 1.31
TWNKQ96RR1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TWNKQ96RR1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TWNKQ96RR1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TWNKQ96RR1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
TWNKQ96RR1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TWNKQ96RR1 AC137767.1-201ENST00000602918 1920 ntBASIC23.24■■□□□ 1.31
TWNKQ96RR1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TWNKQ96RR1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TWNKQ96RR1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TWNKQ96RR1 AC010141.3-201ENST00000456659 717 ntBASIC23.24■■□□□ 1.31
TWNKQ96RR1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.24■■□□□ 1.31
TWNKQ96RR1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TWNKQ96RR1 AC019069.1-201ENST00000610008 1333 ntBASIC23.24■■□□□ 1.31
TWNKQ96RR1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TWNKQ96RR1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TWNKQ96RR1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.24■■□□□ 1.31
TWNKQ96RR1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TWNKQ96RR1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TWNKQ96RR1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TWNKQ96RR1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.23■■□□□ 1.31
TWNKQ96RR1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
TWNKQ96RR1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.23■■□□□ 1.31
TWNKQ96RR1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TWNKQ96RR1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TWNKQ96RR1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.22■■□□□ 1.31
TWNKQ96RR1 AC080038.3-201ENST00000623346 1952 ntBASIC23.22■■□□□ 1.31
TWNKQ96RR1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TWNKQ96RR1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.22■■□□□ 1.31
TWNKQ96RR1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TWNKQ96RR1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.22■■□□□ 1.31
TWNKQ96RR1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.22■■□□□ 1.31
TWNKQ96RR1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TWNKQ96RR1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TWNKQ96RR1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
TWNKQ96RR1 AC233723.2-201ENST00000623798 2106 ntBASIC23.21■■□□□ 1.31
TWNKQ96RR1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TWNKQ96RR1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TWNKQ96RR1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.21■■□□□ 1.31
TWNKQ96RR1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.21■■□□□ 1.31
TWNKQ96RR1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TWNKQ96RR1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.21■■□□□ 1.31
TWNKQ96RR1 ESRRAP2-201ENST00000418437 1549 ntBASIC23.21■■□□□ 1.31
TWNKQ96RR1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TWNKQ96RR1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TWNKQ96RR1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TWNKQ96RR1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TWNKQ96RR1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TWNKQ96RR1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TWNKQ96RR1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TWNKQ96RR1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.2■■□□□ 1.3
TWNKQ96RR1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TWNKQ96RR1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TWNKQ96RR1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.19■■□□□ 1.3
TWNKQ96RR1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TWNKQ96RR1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 AC127496.7-201ENST00000625110 1798 ntBASIC23.19■■□□□ 1.3
TWNKQ96RR1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TWNKQ96RR1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TWNKQ96RR1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 OXCT2P1-201ENST00000447263 1535 ntBASIC23.18■■□□□ 1.3
TWNKQ96RR1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 AC087239.1-201ENST00000622671 572 ntBASIC23.18■■□□□ 1.3
TWNKQ96RR1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms