Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
HMGCLP35914 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLP35914 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLP35914 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLP35914 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.8■■□□□ 1.08
HMGCLP35914 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.8■■□□□ 1.08
HMGCLP35914 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLP35914 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGCLP35914 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGCLP35914 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGCLP35914 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HMGCLP35914 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLP35914 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGCLP35914 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLP35914 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLP35914 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLP35914 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLP35914 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.79■■□□□ 1.08
HMGCLP35914 AC142381.2-201ENST00000566120 298 ntBASIC21.79■■□□□ 1.08
HMGCLP35914 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLP35914 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLP35914 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.79■■□□□ 1.08
HMGCLP35914 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HMGCLP35914 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HMGCLP35914 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HMGCLP35914 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLP35914 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGCLP35914 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMGCLP35914 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.78■■□□□ 1.08
HMGCLP35914 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.78■■□□□ 1.08
HMGCLP35914 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
HMGCLP35914 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.78■■□□□ 1.08
HMGCLP35914 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGCLP35914 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGCLP35914 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HMGCLP35914 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 OXCT2P1-201ENST00000447263 1535 ntBASIC21.77■■□□□ 1.08
HMGCLP35914 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 IGHV3-19-201ENST00000521488 291 ntBASIC21.77■■□□□ 1.08
HMGCLP35914 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.77■■□□□ 1.08
HMGCLP35914 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.77■■□□□ 1.08
HMGCLP35914 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLP35914 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.77■■□□□ 1.08
HMGCLP35914 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HMGCLP35914 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HMGCLP35914 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 GUSBP5-202ENST00000510805 1989 ntBASIC21.76■■□□□ 1.07
HMGCLP35914 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.76■■□□□ 1.07
HMGCLP35914 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.76■■□□□ 1.07
HMGCLP35914 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
HMGCLP35914 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLP35914 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLP35914 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLP35914 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLP35914 AC079089.2-201ENST00000531211 1277 ntBASIC21.75■■□□□ 1.07
HMGCLP35914 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.75■■□□□ 1.07
HMGCLP35914 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLP35914 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.75■■□□□ 1.07
HMGCLP35914 AC080038.3-201ENST00000623346 1952 ntBASIC21.75■■□□□ 1.07
HMGCLP35914 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLP35914 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HMGCLP35914 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HMGCLP35914 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
HMGCLP35914 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGCLP35914 AC242852.2-201ENST00000615738 1807 ntBASIC21.74■■□□□ 1.07
HMGCLP35914 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
HMGCLP35914 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.74■■□□□ 1.07
HMGCLP35914 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.74■■□□□ 1.07
HMGCLP35914 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HMGCLP35914 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.73■■□□□ 1.07
HMGCLP35914 AL117328.2-201ENST00000624617 1940 ntBASIC21.73■■□□□ 1.07
HMGCLP35914 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
HMGCLP35914 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HMGCLP35914 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.73■■□□□ 1.07
HMGCLP35914 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.73■■□□□ 1.07
HMGCLP35914 AC139530.1-201ENST00000575312 1977 ntBASIC21.73■■□□□ 1.07
HMGCLP35914 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms