RNA–Protein interactions for RNA: ENST00000423297.1

GRAMD4P2-201, Transcript of GRAM domain containing 4 pseudogene 2, humanhuman

BASIC

Gene GRAMD4P2, Length 1,097 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4P2-201ENST00000423297 NISCHQ9Y2I1 1504 aa53.64■■■■■ 6.18
GRAMD4P2-201ENST00000423297 CCDC180Q9P1Z9 1646 aa47.77■■■■■ 5.24
GRAMD4P2-201ENST00000423297 ABCC9O60706 1549 aa47.19■■■■■ 5.14
GRAMD4P2-201ENST00000423297 RB1CC1Q8TDY2 1594 aa45.19■■■■■ 4.82
GRAMD4P2-201ENST00000423297 DCAF8L2P0C7V8 631 aa45.18■■■■■ 4.82
GRAMD4P2-201ENST00000423297 NACADO15069 1562 aa45.03■■■■■ 4.8
GRAMD4P2-201ENST00000423297 ZCCHC6Q5VYS8 1495 aaKnown RBP44.61■■■■■ 4.73
GRAMD4P2-201ENST00000423297 MYO15BQ96JP2 1530 aa44.59■■■■■ 4.73
GRAMD4P2-201ENST00000423297 DCAF1Q9Y4B6 1507 aa44.3■■■■■ 4.68
GRAMD4P2-201ENST00000423297 PABPN1Q86U42 306 aaKnown RBP eCLIP44.09■■■■■ 4.65
GRAMD4P2-201ENST00000423297 UNC13AQ9UPW8 1703 aa44.07■■■■■ 4.64
GRAMD4P2-201ENST00000423297 BICRAQ9NZM4 1560 aa43.75■■■■■ 4.59
GRAMD4P2-201ENST00000423297 SCRIBQ14160 1630 aa43.69■■■■■ 4.58
GRAMD4P2-201ENST00000423297 DNAJC5BQ9UF47 199 aa43.53■■■■■ 4.56
GRAMD4P2-201ENST00000423297 SHROOM4Q9ULL8 1493 aa43.27■■■■■ 4.52
GRAMD4P2-201ENST00000423297 EIF4G1Q04637 1599 aaKnown RBP42.69■■■■■ 4.42
GRAMD4P2-201ENST00000423297 CC2D2AQ9P2K1 1620 aa42.6■■■■■ 4.41
GRAMD4P2-201ENST00000423297 CECR2Q9BXF3 1484 aa42.41■■■■■ 4.38
GRAMD4P2-201ENST00000423297 SMARCA4P51532 1647 aa41.69■■■■■ 4.27
GRAMD4P2-201ENST00000423297 BAZ1AQ9NRL2 1556 aaPredicted RBP41.62■■■■■ 4.25
GRAMD4P2-201ENST00000423297 ATAD2BQ9ULI0 1458 aa41.56■■■■■ 4.24
GRAMD4P2-201ENST00000423297 NCAPD3P42695 1498 aa41.55■■■■■ 4.24
GRAMD4P2-201ENST00000423297 SMARCA2P51531 1590 aa41.5■■■■■ 4.23
GRAMD4P2-201ENST00000423297 MROH2BQ7Z745 1585 aa41.35■■■■■ 4.21
GRAMD4P2-201ENST00000423297 HMGXB3Q12766 1538 aa41.31■■■■■ 4.2
GRAMD4P2-201ENST00000423297 BAZ1BQ9UIG0 1483 aaKnown RBP41.25■■■■■ 4.19
GRAMD4P2-201ENST00000423297 PEG3Q9GZU2 1588 aa41.22■■■■■ 4.19
GRAMD4P2-201ENST00000423297 WIZO95785 1651 aa40.9■■■■■ 4.14
GRAMD4P2-201ENST00000423297 RSF1Q96T23 1441 aaPredicted RBP40.77■■■■■ 4.12
GRAMD4P2-201ENST00000423297 ERCC6Q03468 1493 aa40.74■■■■■ 4.11
GRAMD4P2-201ENST00000423297 NESP48681 1621 aa40.71■■■■■ 4.11
GRAMD4P2-201ENST00000423297 LAMC3Q9Y6N6 1575 aa40.52■■■■■ 4.08
GRAMD4P2-201ENST00000423297 TOP2AP11388 1531 aaKnown RBP40.44■■■■■ 4.06
GRAMD4P2-201ENST00000423297 CADPSQ9ULU8 1353 aa40.37■■■■■ 4.05
GRAMD4P2-201ENST00000423297 PDS5BQ9NTI5 1447 aa40.32■■■■■ 4.04
GRAMD4P2-201ENST00000423297 CUX2O14529 1486 aa40.32■■■■■ 4.04
GRAMD4P2-201ENST00000423297 KIF21AQ7Z4S6 1674 aa40.17■■■■■ 4.02
GRAMD4P2-201ENST00000423297 THOC2Q8NI27 1593 aaKnown RBP40.1■■■■■ 4.01
GRAMD4P2-201ENST00000423297 CFTRP13569 1480 aa40.03■■■■■ 4
GRAMD4P2-201ENST00000423297 CCDC88BA6NC98 1476 aa39.99■■■■□ 3.99
GRAMD4P2-201ENST00000423297 FANCD2Q9BXW9 1451 aa39.94■■■■□ 3.98
GRAMD4P2-201ENST00000423297 CEP164Q9UPV0 1460 aa39.92■■■■□ 3.98
GRAMD4P2-201ENST00000423297 MRC2Q9UBG0 1479 aa39.91■■■■□ 3.98
GRAMD4P2-201ENST00000423297 WDR62O43379 1518 aa39.74■■■■□ 3.95
GRAMD4P2-201ENST00000423297 SUPT5HO00267 1087 aaKnown RBP39.68■■■■□ 3.94
GRAMD4P2-201ENST00000423297 PRDM2Q13029 1718 aa39.65■■■■□ 3.94
GRAMD4P2-201ENST00000423297 URB2Q14146 1524 aaKnown RBP39.51■■■■□ 3.92
GRAMD4P2-201ENST00000423297 DNAJC5Q9H3Z4 198 aa39.45■■■■□ 3.91
GRAMD4P2-201ENST00000423297 TOPBP1Q92547 1522 aa39.24■■■■□ 3.87
GRAMD4P2-201ENST00000423297 ABCC8Q09428 1581 aa39.21■■■■□ 3.87
GRAMD4P2-201ENST00000423297 DNMBPQ6XZF7 1577 aa39.15■■■■□ 3.86
GRAMD4P2-201ENST00000423297 IFT140Q96RY7 1462 aa39.07■■■■□ 3.85
GRAMD4P2-201ENST00000423297 ZNF608Q9ULD9 1512 aaPredicted RBP38.93■■■■□ 3.82
GRAMD4P2-201ENST00000423297 POLA1P09884 1462 aaPredicted RBP38.88■■■■□ 3.81
GRAMD4P2-201ENST00000423297 CUX1P39880 1505 aa38.82■■■■□ 3.8
GRAMD4P2-201ENST00000423297 FGD5Q6ZNL6 1462 aa38.77■■■■□ 3.8
GRAMD4P2-201ENST00000423297 TARBP1Q13395 1621 aaKnown RBP38.77■■■■□ 3.8
GRAMD4P2-201ENST00000423297 SOGA1O94964 1423 aa38.76■■■■□ 3.8
GRAMD4P2-201ENST00000423297 RAD54L2Q9Y4B4 1467 aa38.76■■■■□ 3.8
GRAMD4P2-201ENST00000423297 EIF4G3O43432 1585 aaKnown RBP38.74■■■■□ 3.79
GRAMD4P2-201ENST00000423297 AQRO60306 1485 aaKnown RBP eCLIP38.7■■■■□ 3.79
GRAMD4P2-201ENST00000423297 OSCARQ8IYS5 282 aa38.66■■■■□ 3.78
GRAMD4P2-201ENST00000423297 TDRD9Q8NDG6 1382 aaKnown RBP38.58■■■■□ 3.77
GRAMD4P2-201ENST00000423297 WRNQ14191 1432 aaPredicted RBP eCLIP38.5■■■■□ 3.75
GRAMD4P2-201ENST00000423297 WDR97A6NE52 1622 aa38.45■■■■□ 3.75
GRAMD4P2-201ENST00000423297 FBLN2P98095 1184 aa38.41■■■■□ 3.74
GRAMD4P2-201ENST00000423297 SYNJ1O43426 1573 aa38.38■■■■□ 3.73
GRAMD4P2-201ENST00000423297 TOP2BQ02880 1626 aa38.38■■■■□ 3.73
GRAMD4P2-201ENST00000423297 BIVM-ERCC5R4GMW8 1640 aa38.35■■■■□ 3.73
GRAMD4P2-201ENST00000423297 SNAPC4Q5SXM2 1469 aa38.34■■■■□ 3.73
GRAMD4P2-201ENST00000423297 ABCA10Q8WWZ4 1543 aa38.33■■■■□ 3.73
GRAMD4P2-201ENST00000423297 GRIN2BQ13224 1484 aa38.32■■■■□ 3.72
GRAMD4P2-201ENST00000423297 CHD1O14646 1710 aa38.29■■■■□ 3.72
GRAMD4P2-201ENST00000423297 GAPVD1Q14C86 1478 aa38.29■■■■□ 3.72
GRAMD4P2-201ENST00000423297 MAGI1Q96QZ7 1491 aaPredicted RBP38.23■■■■□ 3.71
GRAMD4P2-201ENST00000423297 CHMP7Q8WUX9 453 aaPredicted RBP38.2■■■■□ 3.71
GRAMD4P2-201ENST00000423297 TRIM41Q8WV44 630 aa38.19■■■■□ 3.7
GRAMD4P2-201ENST00000423297 ABCA5Q8WWZ7 1642 aa38.19■■■■□ 3.7
GRAMD4P2-201ENST00000423297 PBRM1Q86U86 1689 aa38.18■■■■□ 3.7
GRAMD4P2-201ENST00000423297 SYNJ2O15056 1496 aa38.09■■■■□ 3.69
GRAMD4P2-201ENST00000423297 RIMBP3CA6NJZ7 1639 aa38.01■■■■□ 3.67
GRAMD4P2-201ENST00000423297 RIMBP3BA6NNM3 1639 aa38.01■■■■□ 3.67
GRAMD4P2-201ENST00000423297 RIMBP3Q9UFD9 1639 aa38.01■■■■□ 3.67
GRAMD4P2-201ENST00000423297 ARHGEF11O15085 1522 aa37.98■■■■□ 3.67
GRAMD4P2-201ENST00000423297 ADAMTS12P58397 1594 aa37.89■■■■□ 3.66
GRAMD4P2-201ENST00000423297 ERICH3Q5RHP9 1530 aa37.87■■■■□ 3.65
GRAMD4P2-201ENST00000423297 CLASP1Q7Z460 1538 aa37.86■■■■□ 3.65
GRAMD4P2-201ENST00000423297 FHAD1B1AJZ9 1412 aa37.83■■■■□ 3.65
GRAMD4P2-201ENST00000423297 GRIN2AQ12879 1464 aa37.82■■■■□ 3.64
GRAMD4P2-201ENST00000423297 CYB5RLQ6IPT4 315 aa37.74■■■■□ 3.63
GRAMD4P2-201ENST00000423297 KIF27Q86VH2 1401 aa37.73■■■■□ 3.63
GRAMD4P2-201ENST00000423297 ARAP1Q96P48 1450 aa37.65■■■■□ 3.62
GRAMD4P2-201ENST00000423297 NUP160Q12769 1436 aa37.63■■■■□ 3.61
GRAMD4P2-201ENST00000423297 CEP170Q5SW79 1584 aa37.63■■■■□ 3.61
GRAMD4P2-201ENST00000423297 IGF1RP08069 1367 aa37.57■■■■□ 3.61
GRAMD4P2-201ENST00000423297 CUL7Q14999 1698 aa37.47■■■■□ 3.59
GRAMD4P2-201ENST00000423297 CARMIL1Q5VZK9 1371 aa37.39■■■■□ 3.58
GRAMD4P2-201ENST00000423297 ERCC6L2Q5T890 1561 aa37.35■■■■□ 3.57
GRAMD4P2-201ENST00000423297 SHROOM2Q13796 1616 aa37.33■■■■□ 3.57
GRAMD4P2-201ENST00000423297 RUSC2Q8N2Y8 1516 aa37.31■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms