Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DUX1O43812 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.03■□□□□ 0.96
DUX1O43812 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.03■□□□□ 0.96
DUX1O43812 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.03■□□□□ 0.96
DUX1O43812 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.03■□□□□ 0.96
DUX1O43812 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DUX1O43812 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
DUX1O43812 DUSP8P3-201ENST00000399571 1760 ntBASIC21.02■□□□□ 0.96
DUX1O43812 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.02■□□□□ 0.96
DUX1O43812 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DUX1O43812 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.02■□□□□ 0.96
DUX1O43812 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DUX1O43812 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.02■□□□□ 0.96
DUX1O43812 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
DUX1O43812 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUX1O43812 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUX1O43812 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.01■□□□□ 0.95
DUX1O43812 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUX1O43812 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUX1O43812 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DUX1O43812 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.01■□□□□ 0.95
DUX1O43812 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUX1O43812 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.01■□□□□ 0.95
DUX1O43812 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUX1O43812 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUX1O43812 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DUX1O43812 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
DUX1O43812 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21■□□□□ 0.95
DUX1O43812 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DUX1O43812 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21■□□□□ 0.95
DUX1O43812 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21■□□□□ 0.95
DUX1O43812 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21■□□□□ 0.95
DUX1O43812 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DUX1O43812 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.99■□□□□ 0.95
DUX1O43812 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.99■□□□□ 0.95
DUX1O43812 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.99■□□□□ 0.95
DUX1O43812 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DUX1O43812 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.99■□□□□ 0.95
DUX1O43812 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
DUX1O43812 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
DUX1O43812 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.99■□□□□ 0.95
DUX1O43812 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.98■□□□□ 0.95
DUX1O43812 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.98■□□□□ 0.95
DUX1O43812 AC004911.1-201ENST00000416316 871 ntBASIC20.98■□□□□ 0.95
DUX1O43812 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DUX1O43812 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUX1O43812 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUX1O43812 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DUX1O43812 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DUX1O43812 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUX1O43812 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUX1O43812 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUX1O43812 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.97■□□□□ 0.95
DUX1O43812 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DUX1O43812 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.97■□□□□ 0.95
DUX1O43812 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.97■□□□□ 0.95
DUX1O43812 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DUX1O43812 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.97■□□□□ 0.95
DUX1O43812 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.97■□□□□ 0.95
DUX1O43812 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DUX1O43812 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.97■□□□□ 0.95
DUX1O43812 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DUX1O43812 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUX1O43812 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.96■□□□□ 0.95
DUX1O43812 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.96■□□□□ 0.95
DUX1O43812 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.96■□□□□ 0.95
DUX1O43812 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.96■□□□□ 0.95
DUX1O43812 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUX1O43812 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
DUX1O43812 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.96■□□□□ 0.95
DUX1O43812 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DUX1O43812 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUX1O43812 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUX1O43812 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
DUX1O43812 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.95■□□□□ 0.94
DUX1O43812 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.95■□□□□ 0.94
DUX1O43812 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.95■□□□□ 0.94
DUX1O43812 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.95■□□□□ 0.94
DUX1O43812 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.95■□□□□ 0.94
DUX1O43812 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
DUX1O43812 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUX1O43812 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.95■□□□□ 0.94
DUX1O43812 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.94■□□□□ 0.94
DUX1O43812 LINC01960-201ENST00000563759 1884 ntBASIC20.94■□□□□ 0.94
DUX1O43812 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.94■□□□□ 0.94
DUX1O43812 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.94■□□□□ 0.94
DUX1O43812 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.94■□□□□ 0.94
DUX1O43812 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.94■□□□□ 0.94
DUX1O43812 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.94■□□□□ 0.94
DUX1O43812 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
DUX1O43812 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUX1O43812 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms