Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT78Q8N1N4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT78Q8N1N4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 AC011298.3-201ENST00000615796 283 ntBASIC21.1■□□□□ 0.97
KRT78Q8N1N4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.1■□□□□ 0.97
KRT78Q8N1N4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 AC087742.1-201ENST00000575880 1738 ntBASIC21.09■□□□□ 0.97
KRT78Q8N1N4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT78Q8N1N4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 OR2I1P-207ENST00000453522 948 ntBASIC21.08■□□□□ 0.97
KRT78Q8N1N4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT78Q8N1N4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
KRT78Q8N1N4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 AC136469.2-201ENST00000623944 1028 ntBASIC21.07■□□□□ 0.96
KRT78Q8N1N4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 AL117328.2-201ENST00000624617 1940 ntBASIC21.07■□□□□ 0.96
KRT78Q8N1N4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT78Q8N1N4 GUSBP5-202ENST00000510805 1989 ntBASIC21.06■□□□□ 0.96
KRT78Q8N1N4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT78Q8N1N4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT78Q8N1N4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT78Q8N1N4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
KRT78Q8N1N4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT78Q8N1N4 UNC93B3-201ENST00000308076 687 ntBASIC21.05■□□□□ 0.96
KRT78Q8N1N4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT78Q8N1N4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT78Q8N1N4 AC068587.7-201ENST00000641602 218 ntBASIC21.05■□□□□ 0.96
KRT78Q8N1N4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
KRT78Q8N1N4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms