Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSF1P09603 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSF1P09603 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.86■□□□□ 0.61
CSF1P09603 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSF1P09603 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CSF1P09603 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.86■□□□□ 0.61
CSF1P09603 RPS2P7-201ENST00000447334 885 ntBASIC18.86■□□□□ 0.61
CSF1P09603 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CSF1P09603 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.86■□□□□ 0.61
CSF1P09603 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSF1P09603 AC019171.1-201ENST00000601251 1056 ntBASIC18.86■□□□□ 0.61
CSF1P09603 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CSF1P09603 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.86■□□□□ 0.61
CSF1P09603 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSF1P09603 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSF1P09603 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSF1P09603 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.85■□□□□ 0.61
CSF1P09603 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSF1P09603 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSF1P09603 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSF1P09603 AL353803.4-201ENST00000565882 1934 ntBASIC18.85■□□□□ 0.61
CSF1P09603 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSF1P09603 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.85■□□□□ 0.61
CSF1P09603 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSF1P09603 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.85■□□□□ 0.61
CSF1P09603 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSF1P09603 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSF1P09603 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSF1P09603 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.85■□□□□ 0.61
CSF1P09603 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSF1P09603 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.84■□□□□ 0.61
CSF1P09603 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.84■□□□□ 0.61
CSF1P09603 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSF1P09603 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.84■□□□□ 0.61
CSF1P09603 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CSF1P09603 AC239859.2-201ENST00000444165 318 ntBASIC18.84■□□□□ 0.61
CSF1P09603 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSF1P09603 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CSF1P09603 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSF1P09603 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSF1P09603 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSF1P09603 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSF1P09603 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSF1P09603 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CSF1P09603 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSF1P09603 FAM99A-202ENST00000538190 1989 ntBASIC18.83■□□□□ 0.61
CSF1P09603 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CSF1P09603 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CSF1P09603 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CSF1P09603 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSF1P09603 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CSF1P09603 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSF1P09603 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CSF1P09603 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CSF1P09603 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.83■□□□□ 0.6
CSF1P09603 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CSF1P09603 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.82■□□□□ 0.6
CSF1P09603 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.82■□□□□ 0.6
CSF1P09603 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.82■□□□□ 0.6
CSF1P09603 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.82■□□□□ 0.6
CSF1P09603 AC087393.1-201ENST00000582896 145 ntBASIC18.82■□□□□ 0.6
CSF1P09603 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.82■□□□□ 0.6
CSF1P09603 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.82■□□□□ 0.6
CSF1P09603 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CSF1P09603 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 AC087742.1-201ENST00000575880 1738 ntBASIC18.82■□□□□ 0.6
CSF1P09603 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSF1P09603 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.82■□□□□ 0.6
CSF1P09603 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
CSF1P09603 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSF1P09603 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CSF1P09603 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CSF1P09603 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.81■□□□□ 0.6
CSF1P09603 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSF1P09603 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSF1P09603 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.81■□□□□ 0.6
CSF1P09603 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSF1P09603 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSF1P09603 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSF1P09603 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSF1P09603 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CSF1P09603 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSF1P09603 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSF1P09603 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.8■□□□□ 0.6
CSF1P09603 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSF1P09603 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.8■□□□□ 0.6
CSF1P09603 Z92544.1-202ENST00000571933 1220 ntBASIC18.8■□□□□ 0.6
CSF1P09603 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.8■□□□□ 0.6
CSF1P09603 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSF1P09603 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms