Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.35■□□□□ 0.85
SDF2Q99470 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.35■□□□□ 0.85
SDF2Q99470 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.35■□□□□ 0.85
SDF2Q99470 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SDF2Q99470 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SDF2Q99470 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDF2Q99470 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDF2Q99470 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SDF2Q99470 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDF2Q99470 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SDF2Q99470 AC080038.3-201ENST00000623346 1952 ntBASIC20.34■□□□□ 0.85
SDF2Q99470 AC133637.1-201ENST00000624115 1537 ntBASIC20.34■□□□□ 0.85
SDF2Q99470 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SDF2Q99470 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SDF2Q99470 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.34■□□□□ 0.85
SDF2Q99470 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SDF2Q99470 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SDF2Q99470 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.34■□□□□ 0.85
SDF2Q99470 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDF2Q99470 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SDF2Q99470 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDF2Q99470 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.34■□□□□ 0.85
SDF2Q99470 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDF2Q99470 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SDF2Q99470 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDF2Q99470 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDF2Q99470 MIR4466-201ENST00000606121 54 ntBASIC20.33■□□□□ 0.85
SDF2Q99470 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.33■□□□□ 0.85
SDF2Q99470 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.33■□□□□ 0.85
SDF2Q99470 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
SDF2Q99470 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.33■□□□□ 0.84
SDF2Q99470 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDF2Q99470 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.33■□□□□ 0.84
SDF2Q99470 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDF2Q99470 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SDF2Q99470 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.32■□□□□ 0.84
SDF2Q99470 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.32■□□□□ 0.84
SDF2Q99470 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDF2Q99470 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SDF2Q99470 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.32■□□□□ 0.84
SDF2Q99470 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDF2Q99470 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDF2Q99470 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDF2Q99470 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDF2Q99470 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SDF2Q99470 AC092171.4-201ENST00000609130 632 ntBASIC20.32■□□□□ 0.84
SDF2Q99470 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SDF2Q99470 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDF2Q99470 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDF2Q99470 AC139530.1-201ENST00000575312 1977 ntBASIC20.32■□□□□ 0.84
SDF2Q99470 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDF2Q99470 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.32■□□□□ 0.84
SDF2Q99470 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDF2Q99470 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDF2Q99470 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDF2Q99470 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDF2Q99470 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDF2Q99470 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDF2Q99470 MIR3181-201ENST00000578512 73 ntBASIC20.31■□□□□ 0.84
SDF2Q99470 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDF2Q99470 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SDF2Q99470 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SDF2Q99470 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SDF2Q99470 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.3■□□□□ 0.84
SDF2Q99470 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.3■□□□□ 0.84
SDF2Q99470 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.3■□□□□ 0.84
SDF2Q99470 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.3■□□□□ 0.84
SDF2Q99470 AC131281.2-201ENST00000520478 145 ntBASIC20.3■□□□□ 0.84
SDF2Q99470 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.3■□□□□ 0.84
SDF2Q99470 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SDF2Q99470 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.3■□□□□ 0.84
SDF2Q99470 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.3■□□□□ 0.84
SDF2Q99470 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDF2Q99470 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.29■□□□□ 0.84
SDF2Q99470 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms