Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.13■■■□□ 2.41
USP6P35125 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.13■■■□□ 2.41
USP6P35125 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.13■■■□□ 2.41
USP6P35125 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.13■■■□□ 2.41
USP6P35125 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.13■■■□□ 2.41
USP6P35125 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
USP6P35125 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC30.13■■■□□ 2.41
USP6P35125 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
USP6P35125 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
USP6P35125 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.13■■■□□ 2.41
USP6P35125 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.13■■■□□ 2.41
USP6P35125 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC30.13■■■□□ 2.41
USP6P35125 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.12■■■□□ 2.41
USP6P35125 AL353803.4-201ENST00000565882 1934 ntBASIC30.12■■■□□ 2.41
USP6P35125 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
USP6P35125 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
USP6P35125 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.12■■■□□ 2.41
USP6P35125 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
USP6P35125 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.12■■■□□ 2.41
USP6P35125 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.12■■■□□ 2.41
USP6P35125 AL139125.2-201ENST00000623134 1869 ntBASIC30.12■■■□□ 2.41
USP6P35125 AC073111.5-205ENST00000641717 521 ntBASIC30.12■■■□□ 2.41
USP6P35125 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC30.11■■■□□ 2.41
USP6P35125 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC30.11■■■□□ 2.41
USP6P35125 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
USP6P35125 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.11■■■□□ 2.41
USP6P35125 AC137761.2-201ENST00000561729 223 ntBASIC30.11■■■□□ 2.41
USP6P35125 AC145350.3-201ENST00000569033 163 ntBASIC30.11■■■□□ 2.41
USP6P35125 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC30.11■■■□□ 2.41
USP6P35125 AC080038.1-201ENST00000611274 1154 ntBASIC30.11■■■□□ 2.41
USP6P35125 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP6P35125 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
USP6P35125 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP6P35125 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP6P35125 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
USP6P35125 COX20-201ENST00000366528 568 ntTSL 2 BASIC30.1■■■□□ 2.41
USP6P35125 HLA-L-209ENST00000420110 1011 ntBASIC30.1■■■□□ 2.41
USP6P35125 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP6P35125 AC010141.3-201ENST00000456659 717 ntBASIC30.1■■■□□ 2.41
USP6P35125 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC30.1■■■□□ 2.41
USP6P35125 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP6P35125 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP6P35125 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP6P35125 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP6P35125 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.09■■■□□ 2.41
USP6P35125 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP6P35125 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
USP6P35125 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC30.09■■■□□ 2.41
USP6P35125 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP6P35125 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP6P35125 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC30.09■■■□□ 2.41
USP6P35125 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC30.09■■■□□ 2.41
USP6P35125 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP6P35125 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP6P35125 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP6P35125 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP6P35125 CDCA4P2-201ENST00000441182 718 ntBASIC30.08■■■□□ 2.41
USP6P35125 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
USP6P35125 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
USP6P35125 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.07■■■□□ 2.4
USP6P35125 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
USP6P35125 AC016769.1-201ENST00000409132 1010 ntBASIC30.06■■■□□ 2.4
USP6P35125 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
USP6P35125 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30.06■■■□□ 2.4
USP6P35125 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
USP6P35125 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
USP6P35125 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC30.06■■■□□ 2.4
USP6P35125 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
USP6P35125 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
USP6P35125 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30.06■■■□□ 2.4
USP6P35125 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
USP6P35125 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
USP6P35125 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
USP6P35125 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
USP6P35125 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.05■■■□□ 2.4
USP6P35125 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC30.05■■■□□ 2.4
USP6P35125 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.05■■■□□ 2.4
USP6P35125 AC087239.1-201ENST00000622671 572 ntBASIC30.05■■■□□ 2.4
USP6P35125 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC30.04■■■□□ 2.4
USP6P35125 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
USP6P35125 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
USP6P35125 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC30.04■■■□□ 2.4
USP6P35125 TK2-208ENST00000545043 1120 ntTSL 2 BASIC30.04■■■□□ 2.4
USP6P35125 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC30.04■■■□□ 2.4
USP6P35125 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC30.04■■■□□ 2.4
USP6P35125 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP6P35125 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP6P35125 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP6P35125 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.03■■■□□ 2.4
USP6P35125 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.03■■■□□ 2.4
USP6P35125 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC30.03■■■□□ 2.4
USP6P35125 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
USP6P35125 ABCB10P4-201ENST00000566803 2184 ntBASIC30.02■■■□□ 2.4
USP6P35125 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
USP6P35125 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC30.02■■■□□ 2.4
USP6P35125 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
USP6P35125 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
USP6P35125 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
USP6P35125 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
USP6P35125 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 713.3 ms