Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC194A0A1B0GVG4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC194A0A1B0GVG4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC194A0A1B0GVG4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC194A0A1B0GVG4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC194A0A1B0GVG4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.14■■□□□ 1.62
CCDC194A0A1B0GVG4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC194A0A1B0GVG4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC194A0A1B0GVG4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
CCDC194A0A1B0GVG4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC194A0A1B0GVG4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CCDC194A0A1B0GVG4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
CCDC194A0A1B0GVG4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
CCDC194A0A1B0GVG4 LINC01960-201ENST00000563759 1884 ntBASIC25.14■■□□□ 1.61
CCDC194A0A1B0GVG4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.14■■□□□ 1.61
CCDC194A0A1B0GVG4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC194A0A1B0GVG4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 AC106739.1-201ENST00000617035 715 ntBASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 AC012676.1-201ENST00000574705 1949 ntBASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC194A0A1B0GVG4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 AC010525.1-201ENST00000585559 441 ntBASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CCDC194A0A1B0GVG4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 AL139246.5-201ENST00000606645 996 ntBASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC194A0A1B0GVG4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC194A0A1B0GVG4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC194A0A1B0GVG4 SLC47A1P1-202ENST00000449666 945 ntBASIC25.09■■□□□ 1.61
CCDC194A0A1B0GVG4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC194A0A1B0GVG4 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC194A0A1B0GVG4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC194A0A1B0GVG4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC194A0A1B0GVG4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CCDC194A0A1B0GVG4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 ESRRAP2-201ENST00000418437 1549 ntBASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC194A0A1B0GVG4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC194A0A1B0GVG4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 AC087742.1-201ENST00000575880 1738 ntBASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC194A0A1B0GVG4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms