Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.56■■□□□ 1.84
PCDHAC2Q9Y5I4 HLA-L-209ENST00000420110 1011 ntBASIC26.56■■□□□ 1.84
PCDHAC2Q9Y5I4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.56■■□□□ 1.84
PCDHAC2Q9Y5I4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.56■■□□□ 1.84
PCDHAC2Q9Y5I4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.56■■□□□ 1.84
PCDHAC2Q9Y5I4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.56■■□□□ 1.84
PCDHAC2Q9Y5I4 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.56■■□□□ 1.84
PCDHAC2Q9Y5I4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHAC2Q9Y5I4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.55■■□□□ 1.84
PCDHAC2Q9Y5I4 AC004687.1-201ENST00000579003 1625 ntBASIC26.55■■□□□ 1.84
PCDHAC2Q9Y5I4 AC004812.2-201ENST00000611079 2094 ntBASIC26.55■■□□□ 1.84
PCDHAC2Q9Y5I4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.55■■□□□ 1.84
PCDHAC2Q9Y5I4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
PCDHAC2Q9Y5I4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
PCDHAC2Q9Y5I4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHAC2Q9Y5I4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 AC006015.1-201ENST00000429970 570 ntBASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHAC2Q9Y5I4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.53■■□□□ 1.84
PCDHAC2Q9Y5I4 RAP2CP1-201ENST00000605103 478 ntBASIC26.53■■□□□ 1.84
PCDHAC2Q9Y5I4 AC080038.1-201ENST00000611274 1154 ntBASIC26.53■■□□□ 1.84
PCDHAC2Q9Y5I4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHAC2Q9Y5I4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHAC2Q9Y5I4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHAC2Q9Y5I4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PCDHAC2Q9Y5I4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 AC004854.2-201ENST00000608450 1441 ntBASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
PCDHAC2Q9Y5I4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHAC2Q9Y5I4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.51■■□□□ 1.83
PCDHAC2Q9Y5I4 AP004607.4-201ENST00000530158 1459 ntBASIC26.51■■□□□ 1.83
PCDHAC2Q9Y5I4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHAC2Q9Y5I4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHAC2Q9Y5I4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHAC2Q9Y5I4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 CDCA4P2-201ENST00000441182 718 ntBASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHAC2Q9Y5I4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 LINC01124-201ENST00000409786 2117 ntBASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHAC2Q9Y5I4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDHAC2Q9Y5I4 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.48■■□□□ 1.83
PCDHAC2Q9Y5I4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHAC2Q9Y5I4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHAC2Q9Y5I4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDHAC2Q9Y5I4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.48■■□□□ 1.83
PCDHAC2Q9Y5I4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDHAC2Q9Y5I4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
PCDHAC2Q9Y5I4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 AC073111.5-205ENST00000641717 521 ntBASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHAC2Q9Y5I4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 AC137761.2-201ENST00000561729 223 ntBASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 AC145350.3-201ENST00000569033 163 ntBASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHAC2Q9Y5I4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms