Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 DUSP8P3-201ENST00000399571 1760 ntBASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 AC024257.2-201ENST00000549699 147 ntBASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 AC133561.4-201ENST00000566112 224 ntBASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 AC110285.6-201ENST00000617652 491 ntBASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PARPBPQ9NWS1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 DUSP8P5-201ENST00000422884 1815 ntBASIC19.65■□□□□ 0.74
PARPBPQ9NWS1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PARPBPQ9NWS1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
PARPBPQ9NWS1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PARPBPQ9NWS1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
PARPBPQ9NWS1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PARPBPQ9NWS1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 EDA-201ENST00000338901 1233 ntBASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PARPBPQ9NWS1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PARPBPQ9NWS1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 AC133561.1-201ENST00000568600 2415 ntBASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.61■□□□□ 0.73
PARPBPQ9NWS1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PARPBPQ9NWS1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PARPBPQ9NWS1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms