Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
HMGCS2P54868 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
HMGCS2P54868 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.86■■□□□ 1.73
HMGCS2P54868 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
HMGCS2P54868 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.86■■□□□ 1.73
HMGCS2P54868 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.86■■□□□ 1.73
HMGCS2P54868 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.86■■□□□ 1.73
HMGCS2P54868 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
HMGCS2P54868 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
HMGCS2P54868 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
HMGCS2P54868 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HMGCS2P54868 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
HMGCS2P54868 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.85■■□□□ 1.73
HMGCS2P54868 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HMGCS2P54868 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.85■■□□□ 1.73
HMGCS2P54868 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.85■■□□□ 1.73
HMGCS2P54868 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.85■■□□□ 1.73
HMGCS2P54868 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HMGCS2P54868 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HMGCS2P54868 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HMGCS2P54868 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.84■■□□□ 1.73
HMGCS2P54868 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HMGCS2P54868 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
HMGCS2P54868 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.84■■□□□ 1.73
HMGCS2P54868 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.84■■□□□ 1.73
HMGCS2P54868 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.84■■□□□ 1.73
HMGCS2P54868 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HMGCS2P54868 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.83■■□□□ 1.73
HMGCS2P54868 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HMGCS2P54868 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
HMGCS2P54868 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HMGCS2P54868 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
HMGCS2P54868 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HMGCS2P54868 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.83■■□□□ 1.73
HMGCS2P54868 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HMGCS2P54868 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HMGCS2P54868 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HMGCS2P54868 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HMGCS2P54868 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
HMGCS2P54868 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.83■■□□□ 1.72
HMGCS2P54868 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HMGCS2P54868 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HMGCS2P54868 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.82■■□□□ 1.72
HMGCS2P54868 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
HMGCS2P54868 KRT18P61-201ENST00000585825 1298 ntBASIC25.82■■□□□ 1.72
HMGCS2P54868 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
HMGCS2P54868 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HMGCS2P54868 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
HMGCS2P54868 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
HMGCS2P54868 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.81■■□□□ 1.72
HMGCS2P54868 ID1-201ENST00000376105 1233 ntBASIC25.81■■□□□ 1.72
HMGCS2P54868 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.81■■□□□ 1.72
HMGCS2P54868 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
HMGCS2P54868 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HMGCS2P54868 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HMGCS2P54868 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
HMGCS2P54868 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
HMGCS2P54868 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HMGCS2P54868 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HMGCS2P54868 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
HMGCS2P54868 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.8■■□□□ 1.72
HMGCS2P54868 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.8■■□□□ 1.72
HMGCS2P54868 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.8■■□□□ 1.72
HMGCS2P54868 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.8■■□□□ 1.72
HMGCS2P54868 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.8■■□□□ 1.72
HMGCS2P54868 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HMGCS2P54868 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
HMGCS2P54868 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.79■■□□□ 1.72
HMGCS2P54868 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.79■■□□□ 1.72
HMGCS2P54868 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.79■■□□□ 1.72
HMGCS2P54868 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
HMGCS2P54868 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
HMGCS2P54868 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
HMGCS2P54868 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.78■■□□□ 1.72
HMGCS2P54868 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
HMGCS2P54868 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
HMGCS2P54868 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
HMGCS2P54868 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.78■■□□□ 1.72
HMGCS2P54868 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.78■■□□□ 1.72
HMGCS2P54868 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
HMGCS2P54868 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
HMGCS2P54868 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.78■■□□□ 1.72
HMGCS2P54868 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
HMGCS2P54868 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
HMGCS2P54868 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.77■■□□□ 1.72
HMGCS2P54868 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.77■■□□□ 1.72
HMGCS2P54868 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HMGCS2P54868 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.77■■□□□ 1.72
HMGCS2P54868 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
HMGCS2P54868 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
HMGCS2P54868 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.76■■□□□ 1.71
HMGCS2P54868 TPRG1LP1-201ENST00000598702 760 ntBASIC25.76■■□□□ 1.71
HMGCS2P54868 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HMGCS2P54868 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
HMGCS2P54868 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HMGCS2P54868 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.75■■□□□ 1.71
HMGCS2P54868 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
HMGCS2P54868 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.74■■□□□ 1.71
HMGCS2P54868 AC004687.1-201ENST00000579003 1625 ntBASIC25.74■■□□□ 1.71
HMGCS2P54868 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms