Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CD3DP04234 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
CD3DP04234 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD3DP04234 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD3DP04234 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.85■□□□□ 0.61
CD3DP04234 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CD3DP04234 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.85■□□□□ 0.61
CD3DP04234 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CD3DP04234 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.85■□□□□ 0.61
CD3DP04234 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD3DP04234 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.85■□□□□ 0.61
CD3DP04234 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD3DP04234 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD3DP04234 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD3DP04234 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD3DP04234 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.85■□□□□ 0.61
CD3DP04234 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.85■□□□□ 0.61
CD3DP04234 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.85■□□□□ 0.61
CD3DP04234 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.84■□□□□ 0.61
CD3DP04234 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.84■□□□□ 0.61
CD3DP04234 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.84■□□□□ 0.61
CD3DP04234 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.84■□□□□ 0.61
CD3DP04234 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CD3DP04234 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD3DP04234 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD3DP04234 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD3DP04234 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD3DP04234 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.83■□□□□ 0.6
CD3DP04234 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD3DP04234 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD3DP04234 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD3DP04234 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD3DP04234 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD3DP04234 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.83■□□□□ 0.6
CD3DP04234 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD3DP04234 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CD3DP04234 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.82■□□□□ 0.6
CD3DP04234 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CD3DP04234 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
CD3DP04234 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CD3DP04234 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.82■□□□□ 0.6
CD3DP04234 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD3DP04234 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD3DP04234 AL353803.4-201ENST00000565882 1934 ntBASIC18.82■□□□□ 0.6
CD3DP04234 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD3DP04234 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD3DP04234 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.82■□□□□ 0.6
CD3DP04234 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD3DP04234 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CD3DP04234 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CD3DP04234 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CD3DP04234 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.81■□□□□ 0.6
CD3DP04234 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CD3DP04234 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.81■□□□□ 0.6
CD3DP04234 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CD3DP04234 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD3DP04234 AC009831.1-201ENST00000580420 1582 ntBASIC18.81■□□□□ 0.6
CD3DP04234 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD3DP04234 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD3DP04234 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.8■□□□□ 0.6
CD3DP04234 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD3DP04234 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD3DP04234 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CD3DP04234 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD3DP04234 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.8■□□□□ 0.6
CD3DP04234 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CD3DP04234 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.8■□□□□ 0.6
CD3DP04234 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD3DP04234 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD3DP04234 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.79■□□□□ 0.6
CD3DP04234 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms