Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE7Q9UBL6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE7Q9UBL6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 AC079630.1-202ENST00000618127 1840 ntBASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE7Q9UBL6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 SLC47A1P1-202ENST00000449666 945 ntBASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE7Q9UBL6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE7Q9UBL6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.64■■□□□ 1.06
CPNE7Q9UBL6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 AC126544.1-201ENST00000580842 1059 ntBASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.64■■□□□ 1.05
CPNE7Q9UBL6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE7Q9UBL6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CPNE7Q9UBL6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE7Q9UBL6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE7Q9UBL6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CPNE7Q9UBL6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE7Q9UBL6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE7Q9UBL6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE7Q9UBL6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE7Q9UBL6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE7Q9UBL6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE7Q9UBL6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CPNE7Q9UBL6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE7Q9UBL6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE7Q9UBL6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CPNE7Q9UBL6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.61■■□□□ 1.05
CPNE7Q9UBL6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms