Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.03■■□□□ 1.76
EFCC1Q9HA90 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
EFCC1Q9HA90 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.02■■□□□ 1.76
EFCC1Q9HA90 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 HLA-L-211ENST00000482052 1765 ntBASIC26.01■■□□□ 1.75
EFCC1Q9HA90 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.01■■□□□ 1.75
EFCC1Q9HA90 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26■■□□□ 1.75
EFCC1Q9HA90 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26■■□□□ 1.75
EFCC1Q9HA90 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
EFCC1Q9HA90 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
EFCC1Q9HA90 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
EFCC1Q9HA90 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26■■□□□ 1.75
EFCC1Q9HA90 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
EFCC1Q9HA90 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26■■□□□ 1.75
EFCC1Q9HA90 RAP2CP1-201ENST00000605103 478 ntBASIC26■■□□□ 1.75
EFCC1Q9HA90 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26■■□□□ 1.75
EFCC1Q9HA90 TMEM191A-211ENST00000637163 1067 ntBASIC26■■□□□ 1.75
EFCC1Q9HA90 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
EFCC1Q9HA90 AC091060.1-201ENST00000623524 1766 ntBASIC26■■□□□ 1.75
EFCC1Q9HA90 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.99■■□□□ 1.75
EFCC1Q9HA90 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCC1Q9HA90 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 CDCA4P2-201ENST00000441182 718 ntBASIC25.97■■□□□ 1.75
EFCC1Q9HA90 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
EFCC1Q9HA90 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 AC006015.1-201ENST00000429970 570 ntBASIC25.96■■□□□ 1.75
EFCC1Q9HA90 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 AC104771.1-201ENST00000603335 964 ntBASIC25.96■■□□□ 1.75
EFCC1Q9HA90 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
EFCC1Q9HA90 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.75
EFCC1Q9HA90 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.95■■□□□ 1.75
EFCC1Q9HA90 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
EFCC1Q9HA90 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.95■■□□□ 1.74
EFCC1Q9HA90 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
EFCC1Q9HA90 AC073111.5-205ENST00000641717 521 ntBASIC25.95■■□□□ 1.74
EFCC1Q9HA90 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
EFCC1Q9HA90 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
EFCC1Q9HA90 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
EFCC1Q9HA90 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
EFCC1Q9HA90 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
EFCC1Q9HA90 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
EFCC1Q9HA90 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms