Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDF2Q99470 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SDF2Q99470 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SDF2Q99470 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDF2Q99470 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDF2Q99470 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDF2Q99470 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.64■□□□□ 0.9
SDF2Q99470 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SDF2Q99470 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.64■□□□□ 0.89
SDF2Q99470 KRT16P3-201ENST00000439127 1283 ntBASIC20.64■□□□□ 0.89
SDF2Q99470 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.64■□□□□ 0.89
SDF2Q99470 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.64■□□□□ 0.89
SDF2Q99470 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDF2Q99470 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDF2Q99470 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SDF2Q99470 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.63■□□□□ 0.89
SDF2Q99470 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDF2Q99470 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDF2Q99470 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.63■□□□□ 0.89
SDF2Q99470 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.63■□□□□ 0.89
SDF2Q99470 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDF2Q99470 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDF2Q99470 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SDF2Q99470 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.63■□□□□ 0.89
SDF2Q99470 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.63■□□□□ 0.89
SDF2Q99470 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.63■□□□□ 0.89
SDF2Q99470 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.63■□□□□ 0.89
SDF2Q99470 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SDF2Q99470 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SDF2Q99470 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDF2Q99470 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDF2Q99470 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDF2Q99470 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.62■□□□□ 0.89
SDF2Q99470 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.62■□□□□ 0.89
SDF2Q99470 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.62■□□□□ 0.89
SDF2Q99470 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDF2Q99470 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDF2Q99470 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDF2Q99470 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.62■□□□□ 0.89
SDF2Q99470 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.62■□□□□ 0.89
SDF2Q99470 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDF2Q99470 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.62■□□□□ 0.89
SDF2Q99470 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SDF2Q99470 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDF2Q99470 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.61■□□□□ 0.89
SDF2Q99470 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.61■□□□□ 0.89
SDF2Q99470 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.61■□□□□ 0.89
SDF2Q99470 DUX4L4-201ENST00000566884 1269 ntBASIC20.61■□□□□ 0.89
SDF2Q99470 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDF2Q99470 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.61■□□□□ 0.89
SDF2Q99470 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDF2Q99470 AC233723.2-201ENST00000623798 2106 ntBASIC20.6■□□□□ 0.89
SDF2Q99470 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDF2Q99470 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDF2Q99470 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDF2Q99470 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDF2Q99470 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.6■□□□□ 0.89
SDF2Q99470 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.6■□□□□ 0.89
SDF2Q99470 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SDF2Q99470 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SDF2Q99470 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDF2Q99470 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDF2Q99470 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDF2Q99470 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.59■□□□□ 0.89
SDF2Q99470 C17orf82-201ENST00000623772 1530 ntBASIC20.59■□□□□ 0.89
SDF2Q99470 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDF2Q99470 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDF2Q99470 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.59■□□□□ 0.89
SDF2Q99470 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDF2Q99470 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.59■□□□□ 0.89
SDF2Q99470 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDF2Q99470 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SDF2Q99470 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDF2Q99470 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SDF2Q99470 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDF2Q99470 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.58■□□□□ 0.89
SDF2Q99470 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SDF2Q99470 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDF2Q99470 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.58■□□□□ 0.89
SDF2Q99470 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDF2Q99470 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDF2Q99470 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDF2Q99470 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SDF2Q99470 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDF2Q99470 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.58■□□□□ 0.88
SDF2Q99470 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDF2Q99470 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.58■□□□□ 0.88
SDF2Q99470 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDF2Q99470 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDF2Q99470 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDF2Q99470 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDF2Q99470 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDF2Q99470 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDF2Q99470 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SDF2Q99470 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.57■□□□□ 0.88
SDF2Q99470 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDF2Q99470 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.57■□□□□ 0.88
SDF2Q99470 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDF2Q99470 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms