Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)32.85■■■□□ 2.851e-6■■□□□ 12.2
PHF6Q8IWS0 H2AFZ-202ENST00000511203 1880 ntTSL 228.68■■■□□ 2.181e-6■■□□□ 12.2
PHF6Q8IWS0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.731e-6■■□□□ 12.2
PHF6Q8IWS0 BCR-212ENST00000479188 658 ntTSL 416.51■□□□□ 0.231e-6■■□□□ 12.2
PHF6Q8IWS0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.231e-6■■□□□ 12.2
PHF6Q8IWS0 H2AFZ-205ENST00000527366 435 ntTSL 315.89■□□□□ 0.131e-6■■□□□ 12.2
PHF6Q8IWS0 BCR-207ENST00000463770 168 ntTSL 1 (best)15.4■□□□□ 0.061e-6■■□□□ 12.2
PHF6Q8IWS0 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.051e-6■■□□□ 12.2
PHF6Q8IWS0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.011e-6■■□□□ 12.2
PHF6Q8IWS0 IFITM2-201ENST00000399815 382 ntTSL 314.83□□□□□ -0.041e-6■■□□□ 12.2
PHF6Q8IWS0 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.041e-6■■□□□ 12.2
PHF6Q8IWS0 RNF187-202ENST00000482739 2467 ntTSL 513.59□□□□□ -0.231e-6■■□□□ 12.2
PHF6Q8IWS0 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)12.84□□□□□ -0.351e-6■■□□□ 12.2
PHF6Q8IWS0 H2AFZ-206ENST00000529158 726 ntTSL 312.1□□□□□ -0.471e-6■■□□□ 12.2
PHF6Q8IWS0 BCR-214ENST00000487679 231 ntTSL 1 (best)9.73□□□□□ -0.851e-6■■□□□ 12.2
PHF6Q8IWS0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.425e-27■■□□□ 12.2
PHF6Q8IWS0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.365e-27■■□□□ 12.2
PHF6Q8IWS0 TNPO2-204ENST00000585886 2362 ntTSL 1 (best)15.34■□□□□ 0.055e-27■■□□□ 12.2
PHF6Q8IWS0 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.175e-27■■□□□ 12.2
PHF6Q8IWS0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.215e-27■■□□□ 12.2
PHF6Q8IWS0 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.575e-27■■□□□ 12.2
PHF6Q8IWS0 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC13.22□□□□□ -0.297e-34■■□□□ 12.1
PHF6Q8IWS0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.77e-10■■□□□ 12.1
PHF6Q8IWS0 RPS17-203ENST00000559273 580 ntTSL 219.02■□□□□ 0.647e-10■■□□□ 12.1
PHF6Q8IWS0 RPS17-205ENST00000560229 776 ntTSL 1 (best)16.13■□□□□ 0.177e-10■■□□□ 12.1
PHF6Q8IWS0 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.527e-10■■□□□ 12.1
PHF6Q8IWS0 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.82□□□□□ -1.167e-10■■□□□ 12.1
PHF6Q8IWS0 RPS17-207ENST00000560639 932 ntTSL 56.16□□□□□ -1.427e-10■■□□□ 12.1
PHF6Q8IWS0 RPS17-202ENST00000558397 583 ntTSL 34.68□□□□□ -1.667e-10■■□□□ 12.1
PHF6Q8IWS0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.632e-6■■□□□ 12.1
PHF6Q8IWS0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.222e-6■■□□□ 12.1
PHF6Q8IWS0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.47■■■□□ 2.152e-59■■□□□ 12.1
PHF6Q8IWS0 RNH1-217ENST00000529768 1019 ntTSL 224.12■■□□□ 1.453e-6■■□□□ 12.1
PHF6Q8IWS0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.18■■□□□ 1.32e-59■■□□□ 12.1
PHF6Q8IWS0 RNH1-210ENST00000525701 1794 ntTSL 521.22■□□□□ 0.993e-6■■□□□ 12.1
PHF6Q8IWS0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.13■□□□□ 0.973e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.973e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.863e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.853e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.793e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-207ENST00000524464 624 ntTSL 519.11■□□□□ 0.653e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.493e-6■■□□□ 12.1
PHF6Q8IWS0 GET4-203ENST00000412734 873 ntTSL 218.05■□□□□ 0.483e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.433e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-214ENST00000529115 855 ntTSL 317.5■□□□□ 0.393e-6■■□□□ 12.1
PHF6Q8IWS0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.383e-6■■□□□ 12.1
PHF6Q8IWS0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.93■□□□□ 0.33e-6■■□□□ 12.1
PHF6Q8IWS0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.113e-6■■□□□ 12.1
PHF6Q8IWS0 RPS20-203ENST00000519369 824 ntTSL 214.98□□□□□ -0.012e-59■■□□□ 12.1
PHF6Q8IWS0 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.173e-6■■□□□ 12.1
PHF6Q8IWS0 RPS20-209ENST00000521289 737 ntTSL 513.3□□□□□ -0.282e-59■■□□□ 12.1
PHF6Q8IWS0 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.352e-59■■□□□ 12.1
PHF6Q8IWS0 RNH1-209ENST00000525522 3281 ntTSL 1 (best)12.7□□□□□ -0.383e-6■■□□□ 12.1
PHF6Q8IWS0 SNORD3C-201ENST00000580533 581 ntBASIC12.09□□□□□ -0.479e-9■■□□□ 12.1
PHF6Q8IWS0 SNORD3C-203ENST00000625845 217 nt11.52□□□□□ -0.579e-9■■□□□ 12.1
PHF6Q8IWS0 SNORD3C-202ENST00000620446 218 nt11.18□□□□□ -0.629e-9■■□□□ 12.1
PHF6Q8IWS0 RPS20-207ENST00000520627 423 ntTSL 5 BASIC10.69□□□□□ -0.72e-59■■□□□ 12.1
PHF6Q8IWS0 RPS20-212ENST00000618656 627 ntTSL 3 BASIC10.53□□□□□ -0.722e-59■■□□□ 12.1
PHF6Q8IWS0 FAM83A-208ENST00000536633 3701 ntTSL 2 BASIC10.46□□□□□ -0.733e-6■■□□□ 12.1
PHF6Q8IWS0 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.822e-59■■□□□ 12.1
PHF6Q8IWS0 RPS20-204ENST00000519606 424 ntTSL 3 BASIC9.93□□□□□ -0.822e-59■■□□□ 12.1
PHF6Q8IWS0 RPS20-206ENST00000520490 402 ntTSL 38.61□□□□□ -1.032e-59■■□□□ 12.1
PHF6Q8IWS0 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.45□□□□□ -1.062e-59■■□□□ 12.1
PHF6Q8IWS0 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.98□□□□□ -1.132e-59■■□□□ 12.1
PHF6Q8IWS0 SNORD54-201ENST00000459159 67 ntBASIC-1.45□□□□□ -2.642e-59■■□□□ 12.1
PHF6Q8IWS0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.284e-6■■□□□ 12.1
PHF6Q8IWS0 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.154e-6■■□□□ 12.1
PHF6Q8IWS0 SLC6A8-207ENST00000466243 544 ntTSL 215.37■□□□□ 0.052e-15■■□□□ 12
PHF6Q8IWS0 MFGE8-206ENST00000558029 849 ntTSL 318.89■□□□□ 0.614e-6■■□□□ 12
PHF6Q8IWS0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.61■□□□□ 0.574e-6■■□□□ 12
PHF6Q8IWS0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.435e-51■■□□□ 12
PHF6Q8IWS0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.195e-51■■□□□ 12
PHF6Q8IWS0 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.145e-51■■□□□ 12
PHF6Q8IWS0 EEF1B2-205ENST00000429769 912 ntTSL 514.82□□□□□ -0.045e-51■■□□□ 12
PHF6Q8IWS0 EEF1B2-211ENST00000482103 587 ntTSL 28.37□□□□□ -1.075e-51■■□□□ 12
PHF6Q8IWS0 EEF1B2-208ENST00000455150 670 ntTSL 58.02□□□□□ -1.135e-51■■□□□ 12
PHF6Q8IWS0 SNORA41-201ENST00000384675 132 ntBASIC4.88□□□□□ -1.635e-51■■□□□ 12
PHF6Q8IWS0 HMGB2-204ENST00000506267 629 ntTSL 325.12■■□□□ 1.612e-6■■□□□ 12
PHF6Q8IWS0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.452e-6■■□□□ 12
PHF6Q8IWS0 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.292e-6■■□□□ 12
PHF6Q8IWS0 HMGB2-205ENST00000511316 1841 ntTSL 213.17□□□□□ -0.32e-6■■□□□ 12
PHF6Q8IWS0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.82e-7■■□□□ 12
PHF6Q8IWS0 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)19.33■□□□□ 0.692e-7■■□□□ 12
PHF6Q8IWS0 AC005726.2-201ENST00000481916 2091 ntTSL 1 (best)20.34■□□□□ 0.851e-7■■□□□ 11.9
PHF6Q8IWS0 RACK1-207ENST00000503170 461 ntTSL 419.85■□□□□ 0.771e-7■■□□□ 11.9
PHF6Q8IWS0 RACK1-232ENST00000514318 581 ntTSL 319.34■□□□□ 0.691e-7■■□□□ 11.9
PHF6Q8IWS0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.41e-7■■□□□ 11.9
PHF6Q8IWS0 ALDOC-209ENST00000584086 686 ntTSL 316.53■□□□□ 0.241e-7■■□□□ 11.9
PHF6Q8IWS0 ALDOC-205ENST00000460201 922 ntTSL 215.43■□□□□ 0.061e-7■■□□□ 11.9
PHF6Q8IWS0 ALDOC-207ENST00000581807 580 ntTSL 314.77□□□□□ -0.051e-7■■□□□ 11.9
PHF6Q8IWS0 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC12.79□□□□□ -0.361e-7■■□□□ 11.9
PHF6Q8IWS0 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.541e-7■■□□□ 11.9
PHF6Q8IWS0 ALDOC-204ENST00000435638 579 ntTSL 311.23□□□□□ -0.611e-7■■□□□ 11.9
PHF6Q8IWS0 SLC6A8-208ENST00000467402 308 ntTSL 514.05□□□□□ -0.165e-14■■□□□ 11.9
PHF6Q8IWS0 MICALL2-202ENST00000413446 3046 ntTSL 212.91□□□□□ -0.341e-6■■□□□ 11.9
PHF6Q8IWS0 PKM-212ENST00000564440 3016 ntTSL 1 (best)8.99□□□□□ -0.973e-6■■□□□ 11.8
PHF6Q8IWS0 FAM182B-205ENST00000478164 992 ntTSL 519.03■□□□□ 0.645e-16■■□□□ 11.7
PHF6Q8IWS0 FAM182B-207ENST00000582267 832 ntTSL 516.4■□□□□ 0.225e-16■■□□□ 11.7
PHF6Q8IWS0 SNORA74D-201ENST00000516404 141 ntBASIC5.25□□□□□ -1.573e-75■■□□□ 11.7
PHF6Q8IWS0 TMEM74B-202ENST00000429036 983 ntAPPRIS ALT2 TSL 317.36■□□□□ 0.372e-6■■□□□ 11.7
Retrieved 100 of 4,170 protein–RNA pairs in 79.2 ms