RNA–Protein interactions for RNA: ENST00000514318.1

RACK1-232, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-232ENST00000514318 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
RACK1-232ENST00000514318 CCDC180Q9P1Z9 1646 aa36.87■■■■□ 3.49
RACK1-232ENST00000514318 ABCC9O60706 1549 aa36.83■■■■□ 3.49
RACK1-232ENST00000514318 RB1CC1Q8TDY2 1594 aa35.07■■■■□ 3.2
RACK1-232ENST00000514318 NACADO15069 1562 aa34.81■■■■□ 3.16
RACK1-232ENST00000514318 DNAJC5BQ9UF47 199 aa34.63■■■■□ 3.13
RACK1-232ENST00000514318 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
RACK1-232ENST00000514318 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
RACK1-232ENST00000514318 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
RACK1-232ENST00000514318 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.07
RACK1-232ENST00000514318 BICRAQ9NZM4 1560 aa34.1■■■■□ 3.05
RACK1-232ENST00000514318 ZCCHC6Q5VYS8 1495 aaKnown RBP33.91■■■■□ 3.02
RACK1-232ENST00000514318 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
RACK1-232ENST00000514318 SHROOM4Q9ULL8 1493 aa33.63■■■□□ 2.97
RACK1-232ENST00000514318 SCRIBQ14160 1630 aa33.51■■■□□ 2.96
RACK1-232ENST00000514318 CC2D2AQ9P2K1 1620 aa33.33■■■□□ 2.93
RACK1-232ENST00000514318 EIF4G1Q04637 1599 aaKnown RBP33.23■■■□□ 2.91
RACK1-232ENST00000514318 CECR2Q9BXF3 1484 aa33.2■■■□□ 2.91
RACK1-232ENST00000514318 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
RACK1-232ENST00000514318 ATAD2BQ9ULI0 1458 aa31.98■■■□□ 2.71
RACK1-232ENST00000514318 SMARCA4P51532 1647 aa31.98■■■□□ 2.71
RACK1-232ENST00000514318 SMARCA2P51531 1590 aa31.92■■■□□ 2.7
RACK1-232ENST00000514318 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
RACK1-232ENST00000514318 DNAJC5Q9H3Z4 198 aa31.88■■■□□ 2.69
RACK1-232ENST00000514318 CUX2O14529 1486 aa31.83■■■□□ 2.69
RACK1-232ENST00000514318 ERCC6Q03468 1493 aa31.79■■■□□ 2.68
RACK1-232ENST00000514318 BAZ1AQ9NRL2 1556 aaPredicted RBP31.78■■■□□ 2.68
RACK1-232ENST00000514318 PEG3Q9GZU2 1588 aa31.69■■■□□ 2.66
RACK1-232ENST00000514318 BAZ1BQ9UIG0 1483 aaKnown RBP31.66■■■□□ 2.66
RACK1-232ENST00000514318 NESP48681 1621 aa31.64■■■□□ 2.65
RACK1-232ENST00000514318 MROH2BQ7Z745 1585 aa31.52■■■□□ 2.64
RACK1-232ENST00000514318 LAMC3Q9Y6N6 1575 aa31.44■■■□□ 2.62
RACK1-232ENST00000514318 THOC2Q8NI27 1593 aaKnown RBP31.42■■■□□ 2.62
RACK1-232ENST00000514318 KIF21AQ7Z4S6 1674 aa31.3■■■□□ 2.6
RACK1-232ENST00000514318 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
RACK1-232ENST00000514318 WIZO95785 1651 aa31.17■■■□□ 2.58
RACK1-232ENST00000514318 CADPSQ9ULU8 1353 aa31.09■■■□□ 2.57
RACK1-232ENST00000514318 MRC2Q9UBG0 1479 aa30.96■■■□□ 2.55
RACK1-232ENST00000514318 WDR62O43379 1518 aa30.93■■■□□ 2.54
RACK1-232ENST00000514318 CEP164Q9UPV0 1460 aa30.81■■■□□ 2.52
RACK1-232ENST00000514318 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
RACK1-232ENST00000514318 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
RACK1-232ENST00000514318 CFTRP13569 1480 aa30.76■■■□□ 2.51
RACK1-232ENST00000514318 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.51
RACK1-232ENST00000514318 PRDM2Q13029 1718 aa30.57■■■□□ 2.48
RACK1-232ENST00000514318 URB2Q14146 1524 aaKnown RBP30.54■■■□□ 2.48
RACK1-232ENST00000514318 CCDC88BA6NC98 1476 aa30.38■■■□□ 2.45
RACK1-232ENST00000514318 TRIM41Q8WV44 630 aa30.36■■■□□ 2.45
RACK1-232ENST00000514318 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
RACK1-232ENST00000514318 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
RACK1-232ENST00000514318 TOPBP1Q92547 1522 aa30.18■■■□□ 2.42
RACK1-232ENST00000514318 ZNF608Q9ULD9 1512 aaPredicted RBP30.17■■■□□ 2.42
RACK1-232ENST00000514318 ABCC8Q09428 1581 aa30.1■■■□□ 2.41
RACK1-232ENST00000514318 DNMBPQ6XZF7 1577 aa30.09■■■□□ 2.41
RACK1-232ENST00000514318 EIF4G3O43432 1585 aaKnown RBP30.05■■■□□ 2.4
RACK1-232ENST00000514318 RIMBP3CA6NJZ7 1639 aa30.01■■■□□ 2.39
RACK1-232ENST00000514318 RIMBP3BA6NNM3 1639 aa30.01■■■□□ 2.39
RACK1-232ENST00000514318 RIMBP3Q9UFD9 1639 aa30.01■■■□□ 2.39
RACK1-232ENST00000514318 TARBP1Q13395 1621 aaKnown RBP29.98■■■□□ 2.39
RACK1-232ENST00000514318 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
RACK1-232ENST00000514318 CHD1O14646 1710 aa29.87■■■□□ 2.37
RACK1-232ENST00000514318 POLA1P09884 1462 aaPredicted RBP29.87■■■□□ 2.37
RACK1-232ENST00000514318 AQRO60306 1485 aaKnown RBP eCLIP29.84■■■□□ 2.373e-31■■■■□ 22.5
RACK1-232ENST00000514318 RAD54L2Q9Y4B4 1467 aa29.73■■■□□ 2.35
RACK1-232ENST00000514318 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
RACK1-232ENST00000514318 SOGA1O94964 1423 aa29.68■■■□□ 2.34
RACK1-232ENST00000514318 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
RACK1-232ENST00000514318 CUX1P39880 1505 aa29.64■■■□□ 2.34
RACK1-232ENST00000514318 TDRD9Q8NDG6 1382 aaKnown RBP29.63■■■□□ 2.33
RACK1-232ENST00000514318 FBLN2P98095 1184 aa29.58■■■□□ 2.33
RACK1-232ENST00000514318 SNAPC4Q5SXM2 1469 aa29.57■■■□□ 2.32
RACK1-232ENST00000514318 ARAP1Q96P48 1450 aa29.57■■■□□ 2.32
RACK1-232ENST00000514318 CYB5RLQ6IPT4 315 aa29.54■■■□□ 2.32
RACK1-232ENST00000514318 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
RACK1-232ENST00000514318 MAGI1Q96QZ7 1491 aaPredicted RBP29.5■■■□□ 2.31
RACK1-232ENST00000514318 GRIN2BQ13224 1484 aa29.47■■■□□ 2.31
RACK1-232ENST00000514318 PBRM1Q86U86 1689 aa29.44■■■□□ 2.3
RACK1-232ENST00000514318 SYNJ1O43426 1573 aa29.44■■■□□ 2.3
RACK1-232ENST00000514318 SYNJ2O15056 1496 aa29.4■■■□□ 2.3
RACK1-232ENST00000514318 CHMP7Q8WUX9 453 aaPredicted RBP29.38■■■□□ 2.29
RACK1-232ENST00000514318 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
RACK1-232ENST00000514318 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
RACK1-232ENST00000514318 ABCA10Q8WWZ4 1543 aa29.33■■■□□ 2.29
RACK1-232ENST00000514318 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
RACK1-232ENST00000514318 TRHP20396 242 aaPredicted RBP29.23■■■□□ 2.27
RACK1-232ENST00000514318 BIVM-ERCC5R4GMW8 1640 aa29.19■■■□□ 2.26
RACK1-232ENST00000514318 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
RACK1-232ENST00000514318 WRNQ14191 1432 aaPredicted RBP eCLIP29.14■■■□□ 2.26
RACK1-232ENST00000514318 ADAMTS12P58397 1594 aa29.12■■■□□ 2.25
RACK1-232ENST00000514318 GRIN2AQ12879 1464 aa29.1■■■□□ 2.25
RACK1-232ENST00000514318 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
RACK1-232ENST00000514318 NUP160Q12769 1436 aa29.02■■■□□ 2.24
RACK1-232ENST00000514318 ERCC6L2Q5T890 1561 aa29.01■■■□□ 2.24
RACK1-232ENST00000514318 ERICH3Q5RHP9 1530 aa28.97■■■□□ 2.23
RACK1-232ENST00000514318 SHROOM2Q13796 1616 aa28.97■■■□□ 2.23
RACK1-232ENST00000514318 FHAD1B1AJZ9 1412 aa28.96■■■□□ 2.23
RACK1-232ENST00000514318 RUSC2Q8N2Y8 1516 aa28.73■■■□□ 2.19
RACK1-232ENST00000514318 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
RACK1-232ENST00000514318 KIF13AQ9H1H9 1805 aa28.65■■■□□ 2.18
RACK1-232ENST00000514318 JPH4Q96JJ6 628 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms