RNA–Protein interactions for RNA: ENST00000314133.3

COX8A-201, Transcript of cytochrome c oxidase subunit 8A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX8A, Length 507 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX8A-201ENST00000314133 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
COX8A-201ENST00000314133 ABCC9O60706 1549 aa30■■■□□ 2.39
COX8A-201ENST00000314133 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
COX8A-201ENST00000314133 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
COX8A-201ENST00000314133 RB1CC1Q8TDY2 1594 aa28.33■■■□□ 2.13
COX8A-201ENST00000314133 NACADO15069 1562 aa28■■■□□ 2.07
COX8A-201ENST00000314133 PABPN1Q86U42 306 aaKnown RBP eCLIP27.8■■■□□ 2.04
COX8A-201ENST00000314133 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
COX8A-201ENST00000314133 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
COX8A-201ENST00000314133 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
COX8A-201ENST00000314133 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
COX8A-201ENST00000314133 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
COX8A-201ENST00000314133 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
COX8A-201ENST00000314133 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
COX8A-201ENST00000314133 DNAJC5Q9H3Z4 198 aa26.93■■□□□ 1.9
COX8A-201ENST00000314133 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
COX8A-201ENST00000314133 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
COX8A-201ENST00000314133 ZCCHC6Q5VYS8 1495 aaKnown RBP26.75■■□□□ 1.87
COX8A-201ENST00000314133 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
COX8A-201ENST00000314133 CUX2O14529 1486 aa26.2■■□□□ 1.78
COX8A-201ENST00000314133 ERCC6Q03468 1493 aa25.95■■□□□ 1.74
COX8A-201ENST00000314133 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
COX8A-201ENST00000314133 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
COX8A-201ENST00000314133 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
COX8A-201ENST00000314133 NESP48681 1621 aa25.59■■□□□ 1.69
COX8A-201ENST00000314133 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
COX8A-201ENST00000314133 THOC2Q8NI27 1593 aaKnown RBP25.51■■□□□ 1.67
COX8A-201ENST00000314133 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
COX8A-201ENST00000314133 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
COX8A-201ENST00000314133 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
COX8A-201ENST00000314133 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
COX8A-201ENST00000314133 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
COX8A-201ENST00000314133 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
COX8A-201ENST00000314133 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
COX8A-201ENST00000314133 PDS5BQ9NTI5 1447 aa25.22■■□□□ 1.63
COX8A-201ENST00000314133 MRC2Q9UBG0 1479 aa25.03■■□□□ 1.6
COX8A-201ENST00000314133 WDR62O43379 1518 aa25.02■■□□□ 1.6
COX8A-201ENST00000314133 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
COX8A-201ENST00000314133 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
COX8A-201ENST00000314133 OSCARQ8IYS5 282 aa24.87■■□□□ 1.57
COX8A-201ENST00000314133 CEP164Q9UPV0 1460 aa24.79■■□□□ 1.56
COX8A-201ENST00000314133 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.55
COX8A-201ENST00000314133 WIZO95785 1651 aa24.66■■□□□ 1.54
COX8A-201ENST00000314133 RIMBP3CA6NJZ7 1639 aa24.62■■□□□ 1.53
COX8A-201ENST00000314133 RIMBP3BA6NNM3 1639 aa24.62■■□□□ 1.53
COX8A-201ENST00000314133 RIMBP3Q9UFD9 1639 aa24.62■■□□□ 1.53
COX8A-201ENST00000314133 CFTRP13569 1480 aa24.59■■□□□ 1.53
COX8A-201ENST00000314133 URB2Q14146 1524 aaKnown RBP24.55■■□□□ 1.52
COX8A-201ENST00000314133 ARHGEF11O15085 1522 aa24.46■■□□□ 1.51
COX8A-201ENST00000314133 PRDM2Q13029 1718 aa24.36■■□□□ 1.49
COX8A-201ENST00000314133 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
COX8A-201ENST00000314133 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
COX8A-201ENST00000314133 TOP2AP11388 1531 aaKnown RBP24.3■■□□□ 1.48
COX8A-201ENST00000314133 CYB5RLQ6IPT4 315 aa24.29■■□□□ 1.48
COX8A-201ENST00000314133 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
COX8A-201ENST00000314133 TRHP20396 242 aaPredicted RBP24.22■■□□□ 1.47
COX8A-201ENST00000314133 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
COX8A-201ENST00000314133 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
COX8A-201ENST00000314133 ARAP1Q96P48 1450 aa24.17■■□□□ 1.46
COX8A-201ENST00000314133 CHD1O14646 1710 aa24.16■■□□□ 1.46
COX8A-201ENST00000314133 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
COX8A-201ENST00000314133 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
COX8A-201ENST00000314133 TARBP1Q13395 1621 aaKnown RBP24.03■■□□□ 1.44
COX8A-201ENST00000314133 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.442e-6■■□□□ 13
COX8A-201ENST00000314133 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
COX8A-201ENST00000314133 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
COX8A-201ENST00000314133 FBLN2P98095 1184 aa23.96■■□□□ 1.43
COX8A-201ENST00000314133 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
COX8A-201ENST00000314133 CLASP1Q7Z460 1538 aa23.86■■□□□ 1.41
COX8A-201ENST00000314133 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
COX8A-201ENST00000314133 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
COX8A-201ENST00000314133 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
COX8A-201ENST00000314133 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
COX8A-201ENST00000314133 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
COX8A-201ENST00000314133 SOGA1O94964 1423 aa23.76■■□□□ 1.39
COX8A-201ENST00000314133 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
COX8A-201ENST00000314133 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
COX8A-201ENST00000314133 SYNJ2O15056 1496 aa23.64■■□□□ 1.38
COX8A-201ENST00000314133 GRIN2BQ13224 1484 aa23.63■■□□□ 1.37
COX8A-201ENST00000314133 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
COX8A-201ENST00000314133 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
COX8A-201ENST00000314133 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
COX8A-201ENST00000314133 CUX1P39880 1505 aa23.5■■□□□ 1.35
COX8A-201ENST00000314133 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
COX8A-201ENST00000314133 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
COX8A-201ENST00000314133 KIF13AQ9H1H9 1805 aa23.37■■□□□ 1.33
COX8A-201ENST00000314133 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
COX8A-201ENST00000314133 CEP170Q5SW79 1584 aa23.33■■□□□ 1.33
COX8A-201ENST00000314133 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
COX8A-201ENST00000314133 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
COX8A-201ENST00000314133 NUP160Q12769 1436 aa23.29■■□□□ 1.32
COX8A-201ENST00000314133 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
COX8A-201ENST00000314133 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
COX8A-201ENST00000314133 ABCC10Q5T3U5 1492 aa23.12■■□□□ 1.29
COX8A-201ENST00000314133 WRNQ14191 1432 aaPredicted RBP eCLIP23.11■■□□□ 1.29
COX8A-201ENST00000314133 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
COX8A-201ENST00000314133 FAM69CQ0P6D2 419 aa23.09■■□□□ 1.29
COX8A-201ENST00000314133 KDM4FA0A1W2PPD8 638 aa23.07■■□□□ 1.28
COX8A-201ENST00000314133 MAPKBP1O60336 1514 aa23.06■■□□□ 1.28
COX8A-201ENST00000314133 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms