RNA–Protein interactions for RNA: ENST00000399815.2

IFITM2-201, Transcript of interferon induced transmembrane protein 2, humanhuman

TSL 3

Gene IFITM2, Length 382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM2-201ENST00000399815 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
IFITM2-201ENST00000399815 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
IFITM2-201ENST00000399815 ABCC9O60706 1549 aa28.48■■■□□ 2.15
IFITM2-201ENST00000399815 RB1CC1Q8TDY2 1594 aa27.55■■■□□ 2
IFITM2-201ENST00000399815 NACADO15069 1562 aa27.48■■□□□ 1.99
IFITM2-201ENST00000399815 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
IFITM2-201ENST00000399815 ZCCHC6Q5VYS8 1495 aaKnown RBP27.2■■□□□ 1.95
IFITM2-201ENST00000399815 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
IFITM2-201ENST00000399815 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
IFITM2-201ENST00000399815 UNC13AQ9UPW8 1703 aa26.91■■□□□ 1.9
IFITM2-201ENST00000399815 BICRAQ9NZM4 1560 aa26.59■■□□□ 1.85
IFITM2-201ENST00000399815 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
IFITM2-201ENST00000399815 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
IFITM2-201ENST00000399815 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
IFITM2-201ENST00000399815 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
IFITM2-201ENST00000399815 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
IFITM2-201ENST00000399815 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
IFITM2-201ENST00000399815 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
IFITM2-201ENST00000399815 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
IFITM2-201ENST00000399815 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.66
IFITM2-201ENST00000399815 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
IFITM2-201ENST00000399815 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
IFITM2-201ENST00000399815 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
IFITM2-201ENST00000399815 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
IFITM2-201ENST00000399815 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
IFITM2-201ENST00000399815 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
IFITM2-201ENST00000399815 BAZ1BQ9UIG0 1483 aaKnown RBP25.07■■□□□ 1.6
IFITM2-201ENST00000399815 WIZO95785 1651 aa24.85■■□□□ 1.57
IFITM2-201ENST00000399815 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
IFITM2-201ENST00000399815 LAMC3Q9Y6N6 1575 aa24.72■■□□□ 1.55
IFITM2-201ENST00000399815 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
IFITM2-201ENST00000399815 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
IFITM2-201ENST00000399815 NESP48681 1621 aa24.57■■□□□ 1.52
IFITM2-201ENST00000399815 CUX2O14529 1486 aa24.52■■□□□ 1.52
IFITM2-201ENST00000399815 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
IFITM2-201ENST00000399815 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
IFITM2-201ENST00000399815 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
IFITM2-201ENST00000399815 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
IFITM2-201ENST00000399815 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
IFITM2-201ENST00000399815 CFTRP13569 1480 aa24.34■■□□□ 1.49
IFITM2-201ENST00000399815 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
IFITM2-201ENST00000399815 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
IFITM2-201ENST00000399815 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
IFITM2-201ENST00000399815 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
IFITM2-201ENST00000399815 WDR62O43379 1518 aa24.2■■□□□ 1.46
IFITM2-201ENST00000399815 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.43
IFITM2-201ENST00000399815 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
IFITM2-201ENST00000399815 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
IFITM2-201ENST00000399815 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
IFITM2-201ENST00000399815 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
IFITM2-201ENST00000399815 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
IFITM2-201ENST00000399815 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
IFITM2-201ENST00000399815 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
IFITM2-201ENST00000399815 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
IFITM2-201ENST00000399815 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
IFITM2-201ENST00000399815 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
IFITM2-201ENST00000399815 CUX1P39880 1505 aa23.57■■□□□ 1.36
IFITM2-201ENST00000399815 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
IFITM2-201ENST00000399815 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
IFITM2-201ENST00000399815 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
IFITM2-201ENST00000399815 SOGA1O94964 1423 aa23.46■■□□□ 1.35
IFITM2-201ENST00000399815 TOP2BQ02880 1626 aa23.43■■□□□ 1.34
IFITM2-201ENST00000399815 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
IFITM2-201ENST00000399815 WRNQ14191 1432 aaPredicted RBP eCLIP23.39■■□□□ 1.33
IFITM2-201ENST00000399815 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.332e-7■■■■■ 35.4
IFITM2-201ENST00000399815 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
IFITM2-201ENST00000399815 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
IFITM2-201ENST00000399815 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
IFITM2-201ENST00000399815 CHD1O14646 1710 aa23.33■■□□□ 1.32
IFITM2-201ENST00000399815 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
IFITM2-201ENST00000399815 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
IFITM2-201ENST00000399815 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
IFITM2-201ENST00000399815 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
IFITM2-201ENST00000399815 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
IFITM2-201ENST00000399815 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
IFITM2-201ENST00000399815 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
IFITM2-201ENST00000399815 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
IFITM2-201ENST00000399815 ERICH3Q5RHP9 1530 aa23.12■■□□□ 1.29
IFITM2-201ENST00000399815 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
IFITM2-201ENST00000399815 FBLN2P98095 1184 aa23.06■■□□□ 1.28
IFITM2-201ENST00000399815 RIMBP3CA6NJZ7 1639 aa23.06■■□□□ 1.28
IFITM2-201ENST00000399815 RIMBP3BA6NNM3 1639 aa23.06■■□□□ 1.28
IFITM2-201ENST00000399815 RIMBP3Q9UFD9 1639 aa23.06■■□□□ 1.28
IFITM2-201ENST00000399815 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
IFITM2-201ENST00000399815 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
IFITM2-201ENST00000399815 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
IFITM2-201ENST00000399815 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
IFITM2-201ENST00000399815 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
IFITM2-201ENST00000399815 CUL7Q14999 1698 aa22.95■■□□□ 1.26
IFITM2-201ENST00000399815 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
IFITM2-201ENST00000399815 NUP160Q12769 1436 aa22.87■■□□□ 1.25
IFITM2-201ENST00000399815 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
IFITM2-201ENST00000399815 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
IFITM2-201ENST00000399815 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
IFITM2-201ENST00000399815 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
IFITM2-201ENST00000399815 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
IFITM2-201ENST00000399815 IGF1RP08069 1367 aa22.74■■□□□ 1.23
IFITM2-201ENST00000399815 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.22
IFITM2-201ENST00000399815 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
IFITM2-201ENST00000399815 KIAA0586Q9BVV6 1533 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms