RNA–Protein interactions for RNA: ENST00000618656.1

RPS20-212, Transcript of ribosomal protein S20, humanhuman

TSL 3 BASIC

Gene RPS20, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS20-212ENST00000618656 NISCHQ9Y2I1 1504 aa23.11■■□□□ 1.29
RPS20-212ENST00000618656 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
RPS20-212ENST00000618656 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
RPS20-212ENST00000618656 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
RPS20-212ENST00000618656 ABCC9O60706 1549 aa20.17■□□□□ 0.82
RPS20-212ENST00000618656 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
RPS20-212ENST00000618656 NACADO15069 1562 aa19.4■□□□□ 0.7
RPS20-212ENST00000618656 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
RPS20-212ENST00000618656 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
RPS20-212ENST00000618656 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
RPS20-212ENST00000618656 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
RPS20-212ENST00000618656 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
RPS20-212ENST00000618656 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
RPS20-212ENST00000618656 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
RPS20-212ENST00000618656 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
RPS20-212ENST00000618656 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
RPS20-212ENST00000618656 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
RPS20-212ENST00000618656 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
RPS20-212ENST00000618656 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
RPS20-212ENST00000618656 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
RPS20-212ENST00000618656 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
RPS20-212ENST00000618656 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
RPS20-212ENST00000618656 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
RPS20-212ENST00000618656 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
RPS20-212ENST00000618656 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
RPS20-212ENST00000618656 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
RPS20-212ENST00000618656 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
RPS20-212ENST00000618656 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
RPS20-212ENST00000618656 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
RPS20-212ENST00000618656 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.44
RPS20-212ENST00000618656 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
RPS20-212ENST00000618656 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
RPS20-212ENST00000618656 WIZO95785 1651 aa17.53■□□□□ 0.4
RPS20-212ENST00000618656 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
RPS20-212ENST00000618656 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
RPS20-212ENST00000618656 NESP48681 1621 aa17.41■□□□□ 0.38
RPS20-212ENST00000618656 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
RPS20-212ENST00000618656 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
RPS20-212ENST00000618656 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
RPS20-212ENST00000618656 CUX2O14529 1486 aa17.31■□□□□ 0.36
RPS20-212ENST00000618656 CFTRP13569 1480 aa17.26■□□□□ 0.35
RPS20-212ENST00000618656 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
RPS20-212ENST00000618656 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
RPS20-212ENST00000618656 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
RPS20-212ENST00000618656 FANCD2Q9BXW9 1451 aa17.15■□□□□ 0.34
RPS20-212ENST00000618656 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
RPS20-212ENST00000618656 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
RPS20-212ENST00000618656 FOXD1Q16676 465 aa17.08■□□□□ 0.32
RPS20-212ENST00000618656 SUPT5HO00267 1087 aaKnown RBP17.06■□□□□ 0.32
RPS20-212ENST00000618656 WDR62O43379 1518 aa17.06■□□□□ 0.32
RPS20-212ENST00000618656 PRDM2Q13029 1718 aa17■□□□□ 0.31
RPS20-212ENST00000618656 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.3
RPS20-212ENST00000618656 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
RPS20-212ENST00000618656 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
RPS20-212ENST00000618656 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
RPS20-212ENST00000618656 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
RPS20-212ENST00000618656 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
RPS20-212ENST00000618656 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
RPS20-212ENST00000618656 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
RPS20-212ENST00000618656 ZNF608Q9ULD9 1512 aaPredicted RBP16.68■□□□□ 0.26
RPS20-212ENST00000618656 SOGA1O94964 1423 aa16.68■□□□□ 0.26
RPS20-212ENST00000618656 CUX1P39880 1505 aa16.67■□□□□ 0.26
RPS20-212ENST00000618656 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
RPS20-212ENST00000618656 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
RPS20-212ENST00000618656 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
RPS20-212ENST00000618656 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
RPS20-212ENST00000618656 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.252e-9■■■■□ 21.3
RPS20-212ENST00000618656 WRNQ14191 1432 aaPredicted RBP eCLIP16.58■□□□□ 0.24
RPS20-212ENST00000618656 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
RPS20-212ENST00000618656 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
RPS20-212ENST00000618656 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
RPS20-212ENST00000618656 TOP2BQ02880 1626 aa16.52■□□□□ 0.24
RPS20-212ENST00000618656 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
RPS20-212ENST00000618656 BIVM-ERCC5R4GMW8 1640 aa16.49■□□□□ 0.23
RPS20-212ENST00000618656 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
RPS20-212ENST00000618656 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
RPS20-212ENST00000618656 SYNJ1O43426 1573 aa16.46■□□□□ 0.23
RPS20-212ENST00000618656 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
RPS20-212ENST00000618656 FBLN2P98095 1184 aa16.44■□□□□ 0.22
RPS20-212ENST00000618656 CHMP7Q8WUX9 453 aaPredicted RBP16.43■□□□□ 0.22
RPS20-212ENST00000618656 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
RPS20-212ENST00000618656 ABCA5Q8WWZ7 1642 aa16.39■□□□□ 0.21
RPS20-212ENST00000618656 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
RPS20-212ENST00000618656 CHD1O14646 1710 aa16.35■□□□□ 0.21
RPS20-212ENST00000618656 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
RPS20-212ENST00000618656 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
RPS20-212ENST00000618656 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
RPS20-212ENST00000618656 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
RPS20-212ENST00000618656 ARHGEF11O15085 1522 aa16.25■□□□□ 0.19
RPS20-212ENST00000618656 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
RPS20-212ENST00000618656 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
RPS20-212ENST00000618656 IGF1RP08069 1367 aa16.24■□□□□ 0.19
RPS20-212ENST00000618656 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
RPS20-212ENST00000618656 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
RPS20-212ENST00000618656 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
RPS20-212ENST00000618656 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
RPS20-212ENST00000618656 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
RPS20-212ENST00000618656 ADRA2BP18089 450 aa16.21■□□□□ 0.19
RPS20-212ENST00000618656 NUP160Q12769 1436 aa16.2■□□□□ 0.18
RPS20-212ENST00000618656 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms