RNA–Protein interactions for RNA: ENST00000305943.7

RNF187-201, Transcript of ring finger protein 187, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RNF187, Length 3,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF187-201ENST00000305943 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
RNF187-201ENST00000305943 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
RNF187-201ENST00000305943 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
RNF187-201ENST00000305943 DCAF8L2P0C7V8 631 aa29.27■■■□□ 2.28
RNF187-201ENST00000305943 PCGF6Q9BYE7 350 aa29.07■■■□□ 2.24
RNF187-201ENST00000305943 HRCP23327 699 aa29.05■■■□□ 2.24
RNF187-201ENST00000305943 PPARGC1BQ86YN6 1023 aaKnown RBP28.99■■■□□ 2.23
RNF187-201ENST00000305943 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
RNF187-201ENST00000305943 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
RNF187-201ENST00000305943 LOC105371045A0A1W2PR82 267 aa28.52■■■□□ 2.16
RNF187-201ENST00000305943 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.15
RNF187-201ENST00000305943 CCDC180Q9P1Z9 1646 aa28.38■■■□□ 2.13
RNF187-201ENST00000305943 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
RNF187-201ENST00000305943 TRIM26Q12899 539 aaPredicted RBP27.84■■■□□ 2.05
RNF187-201ENST00000305943 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
RNF187-201ENST00000305943 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
RNF187-201ENST00000305943 TRIM41Q8WV44 630 aa27.43■■□□□ 1.98
RNF187-201ENST00000305943 SCAF1Q9H7N4 1312 aaKnown RBP27.43■■□□□ 1.98
RNF187-201ENST00000305943 ABCC9O60706 1549 aa27.43■■□□□ 1.98
RNF187-201ENST00000305943 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
RNF187-201ENST00000305943 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
RNF187-201ENST00000305943 TTBK1Q5TCY1 1321 aaPredicted RBP27.18■■□□□ 1.94
RNF187-201ENST00000305943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.12■■□□□ 1.93
RNF187-201ENST00000305943 PELP1Q8IZL8 1130 aaKnown RBP27■■□□□ 1.91
RNF187-201ENST00000305943 RSF1Q96T23 1441 aaPredicted RBP26.95■■□□□ 1.9
RNF187-201ENST00000305943 CCER1Q8TC90 406 aaPredicted RBP26.94■■□□□ 1.9
RNF187-201ENST00000305943 NEUROD1Q13562 356 aa26.89■■□□□ 1.9
RNF187-201ENST00000305943 RB1CC1Q8TDY2 1594 aa26.83■■□□□ 1.89
RNF187-201ENST00000305943 ACIN1Q9UKV3 1341 aaKnown RBP26.75■■□□□ 1.87
RNF187-201ENST00000305943 GTF3C3Q9Y5Q9 886 aa26.73■■□□□ 1.87
RNF187-201ENST00000305943 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
RNF187-201ENST00000305943 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
RNF187-201ENST00000305943 YTHDC1Q96MU7 727 aaKnown RBP26.6■■□□□ 1.85
RNF187-201ENST00000305943 NACADO15069 1562 aa26.52■■□□□ 1.84
RNF187-201ENST00000305943 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
RNF187-201ENST00000305943 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.83
RNF187-201ENST00000305943 CENPBP07199 599 aaPredicted RBP26.44■■□□□ 1.82
RNF187-201ENST00000305943 WIZO95785 1651 aa26.27■■□□□ 1.8
RNF187-201ENST00000305943 UBTFP17480 764 aaKnown RBP26.2■■□□□ 1.79
RNF187-201ENST00000305943 HNRNPUL2Q1KMD3 747 aaKnown RBP26.18■■□□□ 1.78
RNF187-201ENST00000305943 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
RNF187-201ENST00000305943 ZNF316A6NFI3 1004 aaPredicted RBP26.11■■□□□ 1.77
RNF187-201ENST00000305943 MIER1Q8N108 512 aa26.09■■□□□ 1.77
RNF187-201ENST00000305943 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
RNF187-201ENST00000305943 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
RNF187-201ENST00000305943 CEP162Q5TB80 1403 aa26.03■■□□□ 1.76
RNF187-201ENST00000305943 SOGA1O94964 1423 aa26.01■■□□□ 1.75
RNF187-201ENST00000305943 BAZ1AQ9NRL2 1556 aaPredicted RBP25.92■■□□□ 1.74
RNF187-201ENST00000305943 RUSC2Q8N2Y8 1516 aa25.9■■□□□ 1.74
RNF187-201ENST00000305943 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
RNF187-201ENST00000305943 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
RNF187-201ENST00000305943 WRNQ14191 1432 aaPredicted RBP eCLIP25.74■■□□□ 1.71
RNF187-201ENST00000305943 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
RNF187-201ENST00000305943 TNIKQ9UKE5 1360 aa25.71■■□□□ 1.71
RNF187-201ENST00000305943 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
RNF187-201ENST00000305943 MYT1Q01538 1121 aa25.63■■□□□ 1.69
RNF187-201ENST00000305943 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
RNF187-201ENST00000305943 APLP2Q06481 763 aa25.61■■□□□ 1.69
RNF187-201ENST00000305943 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
RNF187-201ENST00000305943 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
RNF187-201ENST00000305943 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
RNF187-201ENST00000305943 ITGAEP38570 1179 aa25.43■■□□□ 1.66
RNF187-201ENST00000305943 CLIP1P30622 1438 aa25.42■■□□□ 1.66
RNF187-201ENST00000305943 SUPT16HQ9Y5B9 1047 aaKnown RBP25.39■■□□□ 1.66
RNF187-201ENST00000305943 BCANQ96GW7 911 aa25.37■■□□□ 1.65
RNF187-201ENST00000305943 KCNH8Q96L42 1107 aa25.34■■□□□ 1.65
RNF187-201ENST00000305943 EEA1Q15075 1411 aa25.28■■□□□ 1.64
RNF187-201ENST00000305943 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
RNF187-201ENST00000305943 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
RNF187-201ENST00000305943 KANK4Q5T7N3 995 aaPredicted RBP25.23■■□□□ 1.63
RNF187-201ENST00000305943 RAPGEF2Q9Y4G8 1499 aa25.22■■□□□ 1.63
RNF187-201ENST00000305943 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.63
RNF187-201ENST00000305943 CEP164Q9UPV0 1460 aa25.19■■□□□ 1.62
RNF187-201ENST00000305943 TSHZ2Q9NRE2 1034 aa25.17■■□□□ 1.62
RNF187-201ENST00000305943 DHX57Q6P158 1386 aaKnown RBP25.15■■□□□ 1.62
RNF187-201ENST00000305943 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
RNF187-201ENST00000305943 HIRIP3Q9BW71 556 aaPredicted RBP25.08■■□□□ 1.61
RNF187-201ENST00000305943 KIF21BO75037 1637 aa25.01■■□□□ 1.59
RNF187-201ENST00000305943 FKBP8Q14318 412 aa24.99■■□□□ 1.59
RNF187-201ENST00000305943 DDX10Q13206 875 aaKnown RBP24.99■■□□□ 1.59
RNF187-201ENST00000305943 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
RNF187-201ENST00000305943 ANP32EQ9BTT0 268 aa24.91■■□□□ 1.58
RNF187-201ENST00000305943 TRIM52Q96A61 297 aa24.9■■□□□ 1.58
RNF187-201ENST00000305943 SIN3AQ96ST3 1273 aa24.89■■□□□ 1.58
RNF187-201ENST00000305943 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
RNF187-201ENST00000305943 CLSPNQ9HAW4 1339 aa24.8■■□□□ 1.56
RNF187-201ENST00000305943 FAM50AQ14320 339 aaKnown RBP24.78■■□□□ 1.56
RNF187-201ENST00000305943 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
RNF187-201ENST00000305943 P3H3Q8IVL6 736 aa24.74■■□□□ 1.55
RNF187-201ENST00000305943 CCNB3Q8WWL7 1395 aa24.73■■□□□ 1.55
RNF187-201ENST00000305943 RAB3GAP2Q9H2M9 1393 aa24.72■■□□□ 1.55
RNF187-201ENST00000305943 NCAPD3P42695 1498 aa24.68■■□□□ 1.54
RNF187-201ENST00000305943 IRX6P78412 446 aaPredicted RBP24.68■■□□□ 1.54
RNF187-201ENST00000305943 BCL11AQ9H165 835 aa24.68■■□□□ 1.54
RNF187-201ENST00000305943 NEFLP07196 543 aa24.67■■□□□ 1.54
RNF187-201ENST00000305943 RBM19Q9Y4C8 960 aaKnown RBP24.64■■□□□ 1.54
RNF187-201ENST00000305943 RRBP1Q9P2E9 1410 aaKnown RBP24.59■■□□□ 1.53
RNF187-201ENST00000305943 CUX1P39880 1505 aa24.58■■□□□ 1.52
RNF187-201ENST00000305943 TOP2BQ02880 1626 aa24.57■■□□□ 1.52
RNF187-201ENST00000305943 PRXQ9BXM0 1461 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms