RNA–Protein interactions for RNA: ENST00000467402.1

SLC6A8-208, Transcript of solute carrier family 6 member 8, humanhuman

TSL 5

Gene SLC6A8, Length 308 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-208ENST00000467402 NISCHQ9Y2I1 1504 aa29.78■■■□□ 2.36
SLC6A8-208ENST00000467402 ABCC9O60706 1549 aa26.68■■□□□ 1.86
SLC6A8-208ENST00000467402 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
SLC6A8-208ENST00000467402 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
SLC6A8-208ENST00000467402 NACADO15069 1562 aa25.27■■□□□ 1.64
SLC6A8-208ENST00000467402 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
SLC6A8-208ENST00000467402 DNAJC5BQ9UF47 199 aa25.06■■□□□ 1.6
SLC6A8-208ENST00000467402 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
SLC6A8-208ENST00000467402 PABPN1Q86U42 306 aaKnown RBP eCLIP24.87■■□□□ 1.57
SLC6A8-208ENST00000467402 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
SLC6A8-208ENST00000467402 ZCCHC6Q5VYS8 1495 aaKnown RBP24.68■■□□□ 1.54
SLC6A8-208ENST00000467402 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
SLC6A8-208ENST00000467402 DCAF1Q9Y4B6 1507 aa24.63■■□□□ 1.53
SLC6A8-208ENST00000467402 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
SLC6A8-208ENST00000467402 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
SLC6A8-208ENST00000467402 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
SLC6A8-208ENST00000467402 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
SLC6A8-208ENST00000467402 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
SLC6A8-208ENST00000467402 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
SLC6A8-208ENST00000467402 ATAD2BQ9ULI0 1458 aa23.26■■□□□ 1.31
SLC6A8-208ENST00000467402 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
SLC6A8-208ENST00000467402 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
SLC6A8-208ENST00000467402 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
SLC6A8-208ENST00000467402 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
SLC6A8-208ENST00000467402 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
SLC6A8-208ENST00000467402 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
SLC6A8-208ENST00000467402 CUX2O14529 1486 aa23.04■■□□□ 1.28
SLC6A8-208ENST00000467402 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
SLC6A8-208ENST00000467402 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
SLC6A8-208ENST00000467402 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
SLC6A8-208ENST00000467402 NESP48681 1621 aa22.92■■□□□ 1.26
SLC6A8-208ENST00000467402 LAMC3Q9Y6N6 1575 aa22.78■■□□□ 1.24
SLC6A8-208ENST00000467402 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
SLC6A8-208ENST00000467402 THOC2Q8NI27 1593 aaKnown RBP22.66■■□□□ 1.22
SLC6A8-208ENST00000467402 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
SLC6A8-208ENST00000467402 WIZO95785 1651 aa22.61■■□□□ 1.21
SLC6A8-208ENST00000467402 KIF21AQ7Z4S6 1674 aa22.56■■□□□ 1.2
SLC6A8-208ENST00000467402 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
SLC6A8-208ENST00000467402 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
SLC6A8-208ENST00000467402 WDR62O43379 1518 aa22.4■■□□□ 1.18
SLC6A8-208ENST00000467402 CFTRP13569 1480 aa22.39■■□□□ 1.17
SLC6A8-208ENST00000467402 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
SLC6A8-208ENST00000467402 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
SLC6A8-208ENST00000467402 FANCD2Q9BXW9 1451 aa22.35■■□□□ 1.17
SLC6A8-208ENST00000467402 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
SLC6A8-208ENST00000467402 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
SLC6A8-208ENST00000467402 OSCARQ8IYS5 282 aa22.02■■□□□ 1.12
SLC6A8-208ENST00000467402 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
SLC6A8-208ENST00000467402 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
SLC6A8-208ENST00000467402 IFT140Q96RY7 1462 aa21.95■■□□□ 1.1
SLC6A8-208ENST00000467402 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
SLC6A8-208ENST00000467402 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
SLC6A8-208ENST00000467402 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
SLC6A8-208ENST00000467402 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
SLC6A8-208ENST00000467402 EIF4G3O43432 1585 aaKnown RBP21.72■■□□□ 1.07
SLC6A8-208ENST00000467402 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
SLC6A8-208ENST00000467402 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.06
SLC6A8-208ENST00000467402 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.061e-18■■■■■ 45.5
SLC6A8-208ENST00000467402 RIMBP3CA6NJZ7 1639 aa21.63■■□□□ 1.05
SLC6A8-208ENST00000467402 RIMBP3BA6NNM3 1639 aa21.63■■□□□ 1.05
SLC6A8-208ENST00000467402 RIMBP3Q9UFD9 1639 aa21.63■■□□□ 1.05
SLC6A8-208ENST00000467402 SOGA1O94964 1423 aa21.63■■□□□ 1.05
SLC6A8-208ENST00000467402 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
SLC6A8-208ENST00000467402 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
SLC6A8-208ENST00000467402 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.04
SLC6A8-208ENST00000467402 FBLN2P98095 1184 aa21.56■■□□□ 1.04
SLC6A8-208ENST00000467402 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
SLC6A8-208ENST00000467402 CUX1P39880 1505 aa21.54■■□□□ 1.04
SLC6A8-208ENST00000467402 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
SLC6A8-208ENST00000467402 CHD1O14646 1710 aa21.52■■□□□ 1.03
SLC6A8-208ENST00000467402 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
SLC6A8-208ENST00000467402 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
SLC6A8-208ENST00000467402 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
SLC6A8-208ENST00000467402 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
SLC6A8-208ENST00000467402 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
SLC6A8-208ENST00000467402 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
SLC6A8-208ENST00000467402 ARAP1Q96P48 1450 aa21.39■■□□□ 1.02
SLC6A8-208ENST00000467402 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
SLC6A8-208ENST00000467402 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
SLC6A8-208ENST00000467402 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
SLC6A8-208ENST00000467402 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
SLC6A8-208ENST00000467402 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
SLC6A8-208ENST00000467402 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
SLC6A8-208ENST00000467402 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
SLC6A8-208ENST00000467402 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
SLC6A8-208ENST00000467402 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
SLC6A8-208ENST00000467402 TOP2BQ02880 1626 aa21.2■□□□□ 0.98
SLC6A8-208ENST00000467402 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
SLC6A8-208ENST00000467402 GRIN2AQ12879 1464 aa21.14■□□□□ 0.98
SLC6A8-208ENST00000467402 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
SLC6A8-208ENST00000467402 NUP160Q12769 1436 aa21.1■□□□□ 0.97
SLC6A8-208ENST00000467402 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
SLC6A8-208ENST00000467402 ERICH3Q5RHP9 1530 aa21.07■□□□□ 0.96
SLC6A8-208ENST00000467402 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
SLC6A8-208ENST00000467402 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
SLC6A8-208ENST00000467402 SHROOM2Q13796 1616 aa20.96■□□□□ 0.95
SLC6A8-208ENST00000467402 JPH4Q96JJ6 628 aa20.91■□□□□ 0.94
SLC6A8-208ENST00000467402 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
SLC6A8-208ENST00000467402 IGF1RP08069 1367 aa20.84■□□□□ 0.93
SLC6A8-208ENST00000467402 KIF27Q86VH2 1401 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms