RNA–Protein interactions for RNA: ENST00000482739.2

RNF187-202, Transcript of ring finger protein 187, humanhuman

TSL 5

Gene RNF187, Length 2,467 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF187-202ENST00000482739 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
RNF187-202ENST00000482739 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
RNF187-202ENST00000482739 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
RNF187-202ENST00000482739 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
RNF187-202ENST00000482739 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.45
RNF187-202ENST00000482739 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
RNF187-202ENST00000482739 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
RNF187-202ENST00000482739 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
RNF187-202ENST00000482739 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
RNF187-202ENST00000482739 ABCC9O60706 1549 aa23.37■■□□□ 1.33
RNF187-202ENST00000482739 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
RNF187-202ENST00000482739 HRCP23327 699 aa23.19■■□□□ 1.3
RNF187-202ENST00000482739 NACADO15069 1562 aa23.13■■□□□ 1.29
RNF187-202ENST00000482739 RSF1Q96T23 1441 aaPredicted RBP23.07■■□□□ 1.28
RNF187-202ENST00000482739 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
RNF187-202ENST00000482739 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
RNF187-202ENST00000482739 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
RNF187-202ENST00000482739 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
RNF187-202ENST00000482739 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
RNF187-202ENST00000482739 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
RNF187-202ENST00000482739 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
RNF187-202ENST00000482739 WIZO95785 1651 aa22.61■■□□□ 1.21
RNF187-202ENST00000482739 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
RNF187-202ENST00000482739 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.19
RNF187-202ENST00000482739 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
RNF187-202ENST00000482739 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
RNF187-202ENST00000482739 SMARCA4P51532 1647 aa22.34■■□□□ 1.17
RNF187-202ENST00000482739 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
RNF187-202ENST00000482739 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
RNF187-202ENST00000482739 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
RNF187-202ENST00000482739 MYT1Q01538 1121 aa22.24■■□□□ 1.15
RNF187-202ENST00000482739 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
RNF187-202ENST00000482739 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
RNF187-202ENST00000482739 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
RNF187-202ENST00000482739 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
RNF187-202ENST00000482739 EHMT2Q96KQ7 1210 aa22.12■■□□□ 1.13
RNF187-202ENST00000482739 ZEB1P37275 1124 aaPredicted RBP22.04■■□□□ 1.12
RNF187-202ENST00000482739 ABCC8Q09428 1581 aa22.02■■□□□ 1.12
RNF187-202ENST00000482739 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
RNF187-202ENST00000482739 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
RNF187-202ENST00000482739 SOGA1O94964 1423 aa21.76■■□□□ 1.07
RNF187-202ENST00000482739 EEA1Q15075 1411 aa21.74■■□□□ 1.07
RNF187-202ENST00000482739 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
RNF187-202ENST00000482739 WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
RNF187-202ENST00000482739 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
RNF187-202ENST00000482739 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
RNF187-202ENST00000482739 CEP162Q5TB80 1403 aa21.65■■□□□ 1.06
RNF187-202ENST00000482739 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
RNF187-202ENST00000482739 CSRNP3Q8WYN3 585 aa21.62■■□□□ 1.05
RNF187-202ENST00000482739 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
RNF187-202ENST00000482739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
RNF187-202ENST00000482739 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
RNF187-202ENST00000482739 CCER1Q8TC90 406 aaPredicted RBP21.52■■□□□ 1.04
RNF187-202ENST00000482739 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
RNF187-202ENST00000482739 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
RNF187-202ENST00000482739 KIF21BO75037 1637 aa21.47■■□□□ 1.03
RNF187-202ENST00000482739 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.03
RNF187-202ENST00000482739 TTBK1Q5TCY1 1321 aaPredicted RBP21.43■■□□□ 1.02
RNF187-202ENST00000482739 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
RNF187-202ENST00000482739 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
RNF187-202ENST00000482739 TOP2BQ02880 1626 aa21.39■■□□□ 1.02
RNF187-202ENST00000482739 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
RNF187-202ENST00000482739 BIVM-ERCC5R4GMW8 1640 aa21.35■■□□□ 1.01
RNF187-202ENST00000482739 GTF3C3Q9Y5Q9 886 aa21.35■■□□□ 1.01
RNF187-202ENST00000482739 RAPGEF2Q9Y4G8 1499 aa21.26■□□□□ 0.99
RNF187-202ENST00000482739 CLIP1P30622 1438 aa21.26■□□□□ 0.99
RNF187-202ENST00000482739 CENPBP07199 599 aaPredicted RBP21.21■□□□□ 0.99
RNF187-202ENST00000482739 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
RNF187-202ENST00000482739 DIEXFQ68CQ4 756 aaKnown RBP21.18■□□□□ 0.98
RNF187-202ENST00000482739 CUX1P39880 1505 aa21.16■□□□□ 0.98
RNF187-202ENST00000482739 CFTRP13569 1480 aa21.16■□□□□ 0.98
RNF187-202ENST00000482739 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
RNF187-202ENST00000482739 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
RNF187-202ENST00000482739 PRXQ9BXM0 1461 aa21.11■□□□□ 0.97
RNF187-202ENST00000482739 KIF27Q86VH2 1401 aa21.03■□□□□ 0.96
RNF187-202ENST00000482739 APLP2Q06481 763 aa21.01■□□□□ 0.95
RNF187-202ENST00000482739 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
RNF187-202ENST00000482739 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
RNF187-202ENST00000482739 ZNF316A6NFI3 1004 aaPredicted RBP20.98■□□□□ 0.95
RNF187-202ENST00000482739 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
RNF187-202ENST00000482739 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
RNF187-202ENST00000482739 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
RNF187-202ENST00000482739 CUX2O14529 1486 aa20.83■□□□□ 0.93
RNF187-202ENST00000482739 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
RNF187-202ENST00000482739 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
RNF187-202ENST00000482739 IGF1RP08069 1367 aa20.77■□□□□ 0.92
RNF187-202ENST00000482739 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
RNF187-202ENST00000482739 BCL11AQ9H165 835 aa20.72■□□□□ 0.91
RNF187-202ENST00000482739 MIER1Q8N108 512 aa20.72■□□□□ 0.91
RNF187-202ENST00000482739 FANCD2Q9BXW9 1451 aa20.72■□□□□ 0.91
RNF187-202ENST00000482739 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
RNF187-202ENST00000482739 RRBP1Q9P2E9 1410 aaKnown RBP20.69■□□□□ 0.9
RNF187-202ENST00000482739 YTHDC1Q96MU7 727 aaKnown RBP20.68■□□□□ 0.9
RNF187-202ENST00000482739 DNMBPQ6XZF7 1577 aa20.66■□□□□ 0.9
RNF187-202ENST00000482739 CLSPNQ9HAW4 1339 aa20.6■□□□□ 0.89
RNF187-202ENST00000482739 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
RNF187-202ENST00000482739 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
RNF187-202ENST00000482739 TOPBP1Q92547 1522 aa20.59■□□□□ 0.89
RNF187-202ENST00000482739 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.89
RNF187-202ENST00000482739 DHX57Q6P158 1386 aaKnown RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms