RNA–Protein interactions for RNA: ENST00000560229.5

RPS17-205, Transcript of ribosomal protein S17, humanhuman

TSL 1 (best)

Gene RPS17, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS17-205ENST00000560229 NISCHQ9Y2I1 1504 aa34.01■■■■□ 3.04
RPS17-205ENST00000560229 ABCC9O60706 1549 aa30.66■■■□□ 2.5
RPS17-205ENST00000560229 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
RPS17-205ENST00000560229 DNAJC5BQ9UF47 199 aa29.02■■■□□ 2.24
RPS17-205ENST00000560229 RB1CC1Q8TDY2 1594 aa28.98■■■□□ 2.23
RPS17-205ENST00000560229 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
RPS17-205ENST00000560229 NACADO15069 1562 aa28.79■■■□□ 2.2
RPS17-205ENST00000560229 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
RPS17-205ENST00000560229 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
RPS17-205ENST00000560229 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
RPS17-205ENST00000560229 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
RPS17-205ENST00000560229 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.09
RPS17-205ENST00000560229 DCAF1Q9Y4B6 1507 aa28■■■□□ 2.07
RPS17-205ENST00000560229 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
RPS17-205ENST00000560229 SHROOM4Q9ULL8 1493 aa27.7■■■□□ 2.02
RPS17-205ENST00000560229 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
RPS17-205ENST00000560229 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
RPS17-205ENST00000560229 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
RPS17-205ENST00000560229 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
RPS17-205ENST00000560229 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
RPS17-205ENST00000560229 DNAJC5Q9H3Z4 198 aa26.57■■□□□ 1.84
RPS17-205ENST00000560229 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
RPS17-205ENST00000560229 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
RPS17-205ENST00000560229 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
RPS17-205ENST00000560229 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
RPS17-205ENST00000560229 NESP48681 1621 aa26.34■■□□□ 1.81
RPS17-205ENST00000560229 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
RPS17-205ENST00000560229 CUX2O14529 1486 aa26.31■■□□□ 1.8
RPS17-205ENST00000560229 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
RPS17-205ENST00000560229 MROH2BQ7Z745 1585 aa26.25■■□□□ 1.79
RPS17-205ENST00000560229 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
RPS17-205ENST00000560229 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
RPS17-205ENST00000560229 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
RPS17-205ENST00000560229 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
RPS17-205ENST00000560229 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
RPS17-205ENST00000560229 WIZO95785 1651 aa25.85■■□□□ 1.73
RPS17-205ENST00000560229 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
RPS17-205ENST00000560229 RSF1Q96T23 1441 aaPredicted RBP25.75■■□□□ 1.71
RPS17-205ENST00000560229 MRC2Q9UBG0 1479 aa25.68■■□□□ 1.7
RPS17-205ENST00000560229 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
RPS17-205ENST00000560229 WDR62O43379 1518 aa25.58■■□□□ 1.68
RPS17-205ENST00000560229 CFTRP13569 1480 aa25.57■■□□□ 1.68
RPS17-205ENST00000560229 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
RPS17-205ENST00000560229 TOP2AP11388 1531 aaKnown RBP25.49■■□□□ 1.67
RPS17-205ENST00000560229 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
RPS17-205ENST00000560229 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
RPS17-205ENST00000560229 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
RPS17-205ENST00000560229 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
RPS17-205ENST00000560229 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
RPS17-205ENST00000560229 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
RPS17-205ENST00000560229 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
RPS17-205ENST00000560229 PRDM2Q13029 1718 aa24.95■■□□□ 1.59
RPS17-205ENST00000560229 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
RPS17-205ENST00000560229 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.581e-9■■■□□ 18.4
RPS17-205ENST00000560229 DNMBPQ6XZF7 1577 aa24.89■■□□□ 1.58
RPS17-205ENST00000560229 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.56
RPS17-205ENST00000560229 FBLN2P98095 1184 aa24.82■■□□□ 1.56
RPS17-205ENST00000560229 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
RPS17-205ENST00000560229 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
RPS17-205ENST00000560229 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
RPS17-205ENST00000560229 TARBP1Q13395 1621 aaKnown RBP24.79■■□□□ 1.56
RPS17-205ENST00000560229 SOGA1O94964 1423 aa24.78■■□□□ 1.56
RPS17-205ENST00000560229 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
RPS17-205ENST00000560229 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
RPS17-205ENST00000560229 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
RPS17-205ENST00000560229 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
RPS17-205ENST00000560229 ARHGEF11O15085 1522 aa24.75■■□□□ 1.55
RPS17-205ENST00000560229 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
RPS17-205ENST00000560229 FGD5Q6ZNL6 1462 aa24.66■■□□□ 1.54
RPS17-205ENST00000560229 CUX1P39880 1505 aa24.65■■□□□ 1.54
RPS17-205ENST00000560229 CHMP7Q8WUX9 453 aaPredicted RBP24.59■■□□□ 1.53
RPS17-205ENST00000560229 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
RPS17-205ENST00000560229 CHD1O14646 1710 aa24.57■■□□□ 1.52
RPS17-205ENST00000560229 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
RPS17-205ENST00000560229 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
RPS17-205ENST00000560229 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
RPS17-205ENST00000560229 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.5
RPS17-205ENST00000560229 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
RPS17-205ENST00000560229 SYNJ2O15056 1496 aa24.4■■□□□ 1.5
RPS17-205ENST00000560229 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
RPS17-205ENST00000560229 CLASP1Q7Z460 1538 aa24.39■■□□□ 1.49
RPS17-205ENST00000560229 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
RPS17-205ENST00000560229 SYNJ1O43426 1573 aa24.33■■□□□ 1.48
RPS17-205ENST00000560229 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
RPS17-205ENST00000560229 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
RPS17-205ENST00000560229 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
RPS17-205ENST00000560229 GRIN2AQ12879 1464 aa24.17■■□□□ 1.46
RPS17-205ENST00000560229 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
RPS17-205ENST00000560229 NUP160Q12769 1436 aa24.11■■□□□ 1.45
RPS17-205ENST00000560229 ERCC6L2Q5T890 1561 aa24.11■■□□□ 1.45
RPS17-205ENST00000560229 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
RPS17-205ENST00000560229 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
RPS17-205ENST00000560229 ADAMTS12P58397 1594 aa24.07■■□□□ 1.44
RPS17-205ENST00000560229 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
RPS17-205ENST00000560229 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
RPS17-205ENST00000560229 JPH4Q96JJ6 628 aa24■■□□□ 1.43
RPS17-205ENST00000560229 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
RPS17-205ENST00000560229 IGF1RP08069 1367 aa23.9■■□□□ 1.42
RPS17-205ENST00000560229 SHROOM2Q13796 1616 aa23.89■■□□□ 1.42
RPS17-205ENST00000560229 KIF27Q86VH2 1401 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms