RNA–Protein interactions for RNA: ENST00000585886.5

TNPO2-204, Transcript of transportin 2, humanhuman

TSL 1 (best)

Gene TNPO2, Length 2,362 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-204ENST00000585886 NISCHQ9Y2I1 1504 aa34.62■■■■□ 3.13
TNPO2-204ENST00000585886 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
TNPO2-204ENST00000585886 ZCCHC6Q5VYS8 1495 aaKnown RBP29.18■■■□□ 2.26
TNPO2-204ENST00000585886 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
TNPO2-204ENST00000585886 DCAF8L2P0C7V8 631 aa28.88■■■□□ 2.21
TNPO2-204ENST00000585886 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
TNPO2-204ENST00000585886 SUPT5HO00267 1087 aaKnown RBP28.33■■■□□ 2.13
TNPO2-204ENST00000585886 ABCC9O60706 1549 aa27.96■■■□□ 2.07
TNPO2-204ENST00000585886 SCRIBQ14160 1630 aa27.77■■■□□ 2.04
TNPO2-204ENST00000585886 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
TNPO2-204ENST00000585886 NACADO15069 1562 aa27.57■■■□□ 2
TNPO2-204ENST00000585886 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
TNPO2-204ENST00000585886 RB1CC1Q8TDY2 1594 aa27.26■■□□□ 1.95
TNPO2-204ENST00000585886 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
TNPO2-204ENST00000585886 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
TNPO2-204ENST00000585886 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
TNPO2-204ENST00000585886 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
TNPO2-204ENST00000585886 WIZO95785 1651 aa26.74■■□□□ 1.87
TNPO2-204ENST00000585886 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
TNPO2-204ENST00000585886 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.859e-7■□□□□ 8.3
TNPO2-204ENST00000585886 BICRAQ9NZM4 1560 aa26.51■■□□□ 1.83
TNPO2-204ENST00000585886 SMARCA4P51532 1647 aa26.49■■□□□ 1.83
TNPO2-204ENST00000585886 LOC105371045A0A1W2PR82 267 aa26.44■■□□□ 1.82
TNPO2-204ENST00000585886 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
TNPO2-204ENST00000585886 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
TNPO2-204ENST00000585886 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
TNPO2-204ENST00000585886 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
TNPO2-204ENST00000585886 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
TNPO2-204ENST00000585886 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
TNPO2-204ENST00000585886 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
TNPO2-204ENST00000585886 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
TNPO2-204ENST00000585886 ABCC8Q09428 1581 aa25.96■■□□□ 1.75
TNPO2-204ENST00000585886 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
TNPO2-204ENST00000585886 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
TNPO2-204ENST00000585886 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
TNPO2-204ENST00000585886 SOGA1O94964 1423 aa25.59■■□□□ 1.69
TNPO2-204ENST00000585886 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
TNPO2-204ENST00000585886 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
TNPO2-204ENST00000585886 HRCP23327 699 aa25.5■■□□□ 1.67
TNPO2-204ENST00000585886 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
TNPO2-204ENST00000585886 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
TNPO2-204ENST00000585886 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
TNPO2-204ENST00000585886 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
TNPO2-204ENST00000585886 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.65
TNPO2-204ENST00000585886 EEA1Q15075 1411 aa25.36■■□□□ 1.65
TNPO2-204ENST00000585886 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
TNPO2-204ENST00000585886 UBTFP17480 764 aaKnown RBP25.26■■□□□ 1.63
TNPO2-204ENST00000585886 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
TNPO2-204ENST00000585886 TNIKQ9UKE5 1360 aa25.2■■□□□ 1.63
TNPO2-204ENST00000585886 TOP2BQ02880 1626 aa25.2■■□□□ 1.62
TNPO2-204ENST00000585886 CC2D2AQ9P2K1 1620 aa25.18■■□□□ 1.62
TNPO2-204ENST00000585886 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
TNPO2-204ENST00000585886 CFTRP13569 1480 aa25.16■■□□□ 1.62
TNPO2-204ENST00000585886 BIVM-ERCC5R4GMW8 1640 aa25.13■■□□□ 1.61
TNPO2-204ENST00000585886 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
TNPO2-204ENST00000585886 CUX1P39880 1505 aa25.08■■□□□ 1.6
TNPO2-204ENST00000585886 KIF21BO75037 1637 aa25.05■■□□□ 1.6
TNPO2-204ENST00000585886 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
TNPO2-204ENST00000585886 RAPGEF2Q9Y4G8 1499 aa24.99■■□□□ 1.59
TNPO2-204ENST00000585886 CADPSQ9ULU8 1353 aa24.98■■□□□ 1.59
TNPO2-204ENST00000585886 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
TNPO2-204ENST00000585886 RANGAP1P46060 587 aaPredicted RBP24.93■■□□□ 1.58
TNPO2-204ENST00000585886 CLIP1P30622 1438 aa24.88■■□□□ 1.57
TNPO2-204ENST00000585886 KIF27Q86VH2 1401 aa24.83■■□□□ 1.57
TNPO2-204ENST00000585886 PRXQ9BXM0 1461 aa24.79■■□□□ 1.56
TNPO2-204ENST00000585886 FANCD2Q9BXW9 1451 aa24.76■■□□□ 1.55
TNPO2-204ENST00000585886 NESP48681 1621 aa24.75■■□□□ 1.55
TNPO2-204ENST00000585886 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
TNPO2-204ENST00000585886 FGD5Q6ZNL6 1462 aa24.72■■□□□ 1.55
TNPO2-204ENST00000585886 CUX2O14529 1486 aa24.72■■□□□ 1.55
TNPO2-204ENST00000585886 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
TNPO2-204ENST00000585886 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
TNPO2-204ENST00000585886 DNAJC5BQ9UF47 199 aa24.66■■□□□ 1.54
TNPO2-204ENST00000585886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.53
TNPO2-204ENST00000585886 IGF1RP08069 1367 aa24.59■■□□□ 1.53
TNPO2-204ENST00000585886 APLP2Q06481 763 aa24.58■■□□□ 1.52
TNPO2-204ENST00000585886 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
TNPO2-204ENST00000585886 TOPBP1Q92547 1522 aa24.54■■□□□ 1.52
TNPO2-204ENST00000585886 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
TNPO2-204ENST00000585886 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
TNPO2-204ENST00000585886 CCER1Q8TC90 406 aaPredicted RBP24.53■■□□□ 1.52
TNPO2-204ENST00000585886 LAMC3Q9Y6N6 1575 aa24.52■■□□□ 1.52
TNPO2-204ENST00000585886 POLA1P09884 1462 aaPredicted RBP24.49■■□□□ 1.51
TNPO2-204ENST00000585886 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
TNPO2-204ENST00000585886 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
TNPO2-204ENST00000585886 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
TNPO2-204ENST00000585886 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
TNPO2-204ENST00000585886 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
TNPO2-204ENST00000585886 PDS5BQ9NTI5 1447 aa24.38■■□□□ 1.49
TNPO2-204ENST00000585886 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
TNPO2-204ENST00000585886 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
TNPO2-204ENST00000585886 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
TNPO2-204ENST00000585886 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
TNPO2-204ENST00000585886 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
TNPO2-204ENST00000585886 CUL7Q14999 1698 aa24.2■■□□□ 1.46
TNPO2-204ENST00000585886 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
TNPO2-204ENST00000585886 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
TNPO2-204ENST00000585886 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
TNPO2-204ENST00000585886 ATP1B4Q9UN42 357 aaPredicted RBP24.09■■□□□ 1.45
TNPO2-204ENST00000585886 CTTNBP2Q8WZ74 1663 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms