RNA–Protein interactions for RNA: ENST00000009589.7

RPS20-201, Transcript of ribosomal protein S20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS20, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS20-201ENST00000009589 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
RPS20-201ENST00000009589 NISCHQ9Y2I1 1504 aa21.08■□□□□ 0.96
RPS20-201ENST00000009589 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
RPS20-201ENST00000009589 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
RPS20-201ENST00000009589 ABCC9O60706 1549 aa18.78■□□□□ 0.6
RPS20-201ENST00000009589 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
RPS20-201ENST00000009589 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
RPS20-201ENST00000009589 RB1CC1Q8TDY2 1594 aa17.93■□□□□ 0.46
RPS20-201ENST00000009589 NACADO15069 1562 aa17.84■□□□□ 0.45
RPS20-201ENST00000009589 DCAF8L2P0C7V8 631 aa17.82■□□□□ 0.44
RPS20-201ENST00000009589 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
RPS20-201ENST00000009589 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
RPS20-201ENST00000009589 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
RPS20-201ENST00000009589 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
RPS20-201ENST00000009589 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
RPS20-201ENST00000009589 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
RPS20-201ENST00000009589 UNC13AQ9UPW8 1703 aa17.31■□□□□ 0.36
RPS20-201ENST00000009589 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
RPS20-201ENST00000009589 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
RPS20-201ENST00000009589 FOXD1Q16676 465 aa17.08■□□□□ 0.32
RPS20-201ENST00000009589 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
RPS20-201ENST00000009589 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
RPS20-201ENST00000009589 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
RPS20-201ENST00000009589 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
RPS20-201ENST00000009589 NCAPD3P42695 1498 aa16.49■□□□□ 0.23
RPS20-201ENST00000009589 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
RPS20-201ENST00000009589 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
RPS20-201ENST00000009589 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
RPS20-201ENST00000009589 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
RPS20-201ENST00000009589 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
RPS20-201ENST00000009589 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
RPS20-201ENST00000009589 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
RPS20-201ENST00000009589 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
RPS20-201ENST00000009589 CUX2O14529 1486 aa16.21■□□□□ 0.19
RPS20-201ENST00000009589 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
RPS20-201ENST00000009589 ADRA2BP18089 450 aa16.15■□□□□ 0.18
RPS20-201ENST00000009589 PIAS4Q8N2W9 510 aaPredicted RBP16.13■□□□□ 0.17
RPS20-201ENST00000009589 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
RPS20-201ENST00000009589 NESP48681 1621 aa16.12■□□□□ 0.17
RPS20-201ENST00000009589 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
RPS20-201ENST00000009589 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
RPS20-201ENST00000009589 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
RPS20-201ENST00000009589 MSH5O43196 834 aa16.03■□□□□ 0.16
RPS20-201ENST00000009589 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
RPS20-201ENST00000009589 WIZO95785 1651 aa15.96■□□□□ 0.15
RPS20-201ENST00000009589 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
RPS20-201ENST00000009589 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
RPS20-201ENST00000009589 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
RPS20-201ENST00000009589 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
RPS20-201ENST00000009589 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.13
RPS20-201ENST00000009589 CFTRP13569 1480 aa15.82■□□□□ 0.12
RPS20-201ENST00000009589 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
RPS20-201ENST00000009589 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
RPS20-201ENST00000009589 WDR62O43379 1518 aa15.78■□□□□ 0.12
RPS20-201ENST00000009589 CCDC88BA6NC98 1476 aa15.67■□□□□ 0.1
RPS20-201ENST00000009589 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
RPS20-201ENST00000009589 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
RPS20-201ENST00000009589 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
RPS20-201ENST00000009589 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
RPS20-201ENST00000009589 PRDM2Q13029 1718 aa15.5■□□□□ 0.07
RPS20-201ENST00000009589 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
RPS20-201ENST00000009589 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
RPS20-201ENST00000009589 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
RPS20-201ENST00000009589 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
RPS20-201ENST00000009589 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
RPS20-201ENST00000009589 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
RPS20-201ENST00000009589 SOGA1O94964 1423 aa15.31■□□□□ 0.04
RPS20-201ENST00000009589 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.042e-9■■■■□ 21.3
RPS20-201ENST00000009589 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
RPS20-201ENST00000009589 TARBP1Q13395 1621 aaKnown RBP15.28■□□□□ 0.04
RPS20-201ENST00000009589 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.03
RPS20-201ENST00000009589 FBLN2P98095 1184 aa15.25■□□□□ 0.03
RPS20-201ENST00000009589 FGD5Q6ZNL6 1462 aa15.25■□□□□ 0.03
RPS20-201ENST00000009589 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
RPS20-201ENST00000009589 WDR97A6NE52 1622 aa15.22■□□□□ 0.03
RPS20-201ENST00000009589 CUX1P39880 1505 aa15.22■□□□□ 0.03
RPS20-201ENST00000009589 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
RPS20-201ENST00000009589 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
RPS20-201ENST00000009589 GRIN2BQ13224 1484 aa15.17■□□□□ 0.02
RPS20-201ENST00000009589 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
RPS20-201ENST00000009589 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
RPS20-201ENST00000009589 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
RPS20-201ENST00000009589 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
RPS20-201ENST00000009589 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
RPS20-201ENST00000009589 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
RPS20-201ENST00000009589 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
RPS20-201ENST00000009589 ABCA10Q8WWZ4 1543 aa15.11■□□□□ 0.01
RPS20-201ENST00000009589 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
RPS20-201ENST00000009589 CHD1O14646 1710 aa15.1■□□□□ 0.01
RPS20-201ENST00000009589 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
RPS20-201ENST00000009589 SYNJ1O43426 1573 aa15.07■□□□□ 0
RPS20-201ENST00000009589 CLASP1Q7Z460 1538 aa15.02■□□□□ -0
RPS20-201ENST00000009589 ARAP1Q96P48 1450 aa15.02■□□□□ -0
RPS20-201ENST00000009589 TOP2BQ02880 1626 aa15.01□□□□□ -0.01
RPS20-201ENST00000009589 ABCA5Q8WWZ7 1642 aa15.01□□□□□ -0.01
RPS20-201ENST00000009589 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
RPS20-201ENST00000009589 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
RPS20-201ENST00000009589 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
RPS20-201ENST00000009589 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
RPS20-201ENST00000009589 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms