Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.53■□□□□ 0.88
CEACAM4O75871 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.53■□□□□ 0.88
CEACAM4O75871 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CEACAM4O75871 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CEACAM4O75871 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CEACAM4O75871 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.53■□□□□ 0.88
CEACAM4O75871 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CEACAM4O75871 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CEACAM4O75871 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CEACAM4O75871 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CEACAM4O75871 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.53■□□□□ 0.88
CEACAM4O75871 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CEACAM4O75871 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.53■□□□□ 0.88
CEACAM4O75871 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.52■□□□□ 0.88
CEACAM4O75871 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CEACAM4O75871 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CEACAM4O75871 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CEACAM4O75871 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.52■□□□□ 0.88
CEACAM4O75871 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CEACAM4O75871 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.52■□□□□ 0.88
CEACAM4O75871 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CEACAM4O75871 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CEACAM4O75871 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.52■□□□□ 0.88
CEACAM4O75871 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CEACAM4O75871 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CEACAM4O75871 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CEACAM4O75871 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CEACAM4O75871 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.52■□□□□ 0.87
CEACAM4O75871 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CEACAM4O75871 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.51■□□□□ 0.87
CEACAM4O75871 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.51■□□□□ 0.87
CEACAM4O75871 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CEACAM4O75871 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.51■□□□□ 0.87
CEACAM4O75871 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.51■□□□□ 0.87
CEACAM4O75871 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.51■□□□□ 0.87
CEACAM4O75871 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.51■□□□□ 0.87
CEACAM4O75871 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.51■□□□□ 0.87
CEACAM4O75871 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CEACAM4O75871 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CEACAM4O75871 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CEACAM4O75871 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.51■□□□□ 0.87
CEACAM4O75871 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CEACAM4O75871 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.5■□□□□ 0.87
CEACAM4O75871 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CEACAM4O75871 AC144652.1-201ENST00000609974 1624 ntBASIC20.5■□□□□ 0.87
CEACAM4O75871 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CEACAM4O75871 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.5■□□□□ 0.87
CEACAM4O75871 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CEACAM4O75871 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.5■□□□□ 0.87
CEACAM4O75871 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CEACAM4O75871 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CEACAM4O75871 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.5■□□□□ 0.87
CEACAM4O75871 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.5■□□□□ 0.87
CEACAM4O75871 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CEACAM4O75871 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CEACAM4O75871 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.5■□□□□ 0.87
CEACAM4O75871 LINC01529-204ENST00000636474 1715 ntBASIC20.5■□□□□ 0.87
CEACAM4O75871 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CEACAM4O75871 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CEACAM4O75871 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CEACAM4O75871 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CEACAM4O75871 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.49■□□□□ 0.87
CEACAM4O75871 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.49■□□□□ 0.87
CEACAM4O75871 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CEACAM4O75871 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CEACAM4O75871 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.49■□□□□ 0.87
CEACAM4O75871 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CEACAM4O75871 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CEACAM4O75871 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.48■□□□□ 0.87
CEACAM4O75871 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.48■□□□□ 0.87
CEACAM4O75871 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CEACAM4O75871 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CEACAM4O75871 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.48■□□□□ 0.87
CEACAM4O75871 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.48■□□□□ 0.87
CEACAM4O75871 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.48■□□□□ 0.87
CEACAM4O75871 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.48■□□□□ 0.87
CEACAM4O75871 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM4O75871 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CEACAM4O75871 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.47■□□□□ 0.87
CEACAM4O75871 AC135731.1-201ENST00000569415 2548 ntBASIC20.47■□□□□ 0.87
CEACAM4O75871 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CEACAM4O75871 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.47■□□□□ 0.87
CEACAM4O75871 AC105233.4-201ENST00000642045 216 ntBASIC20.47■□□□□ 0.87
CEACAM4O75871 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CEACAM4O75871 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CEACAM4O75871 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CEACAM4O75871 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CEACAM4O75871 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CEACAM4O75871 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms