Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
NDUFA1O15239 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.23■□□□□ 0.03
NDUFA1O15239 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA1O15239 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA1O15239 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.23■□□□□ 0.03
NDUFA1O15239 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA1O15239 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA1O15239 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA1O15239 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
NDUFA1O15239 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.23■□□□□ 0.03
NDUFA1O15239 MIR6765-201ENST00000614092 87 ntBASIC15.23■□□□□ 0.03
NDUFA1O15239 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA1O15239 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
NDUFA1O15239 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA1O15239 AL137060.1-201ENST00000618151 2648 ntBASIC15.23■□□□□ 0.03
NDUFA1O15239 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
NDUFA1O15239 AC090877.2-201ENST00000558441 1738 ntBASIC15.23■□□□□ 0.03
NDUFA1O15239 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA1O15239 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA1O15239 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA1O15239 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NDUFA1O15239 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NDUFA1O15239 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA1O15239 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NDUFA1O15239 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.22■□□□□ 0.03
NDUFA1O15239 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA1O15239 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NDUFA1O15239 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NDUFA1O15239 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.22■□□□□ 0.03
NDUFA1O15239 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA1O15239 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA1O15239 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NDUFA1O15239 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA1O15239 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA1O15239 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
NDUFA1O15239 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA1O15239 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA1O15239 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA1O15239 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
NDUFA1O15239 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.21■□□□□ 0.03
NDUFA1O15239 AC087393.1-201ENST00000582896 145 ntBASIC15.21■□□□□ 0.03
NDUFA1O15239 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA1O15239 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA1O15239 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA1O15239 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFA1O15239 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.21■□□□□ 0.02
NDUFA1O15239 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFA1O15239 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NDUFA1O15239 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFA1O15239 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NDUFA1O15239 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFA1O15239 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NDUFA1O15239 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA1O15239 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA1O15239 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA1O15239 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA1O15239 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA1O15239 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFA1O15239 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA1O15239 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NDUFA1O15239 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA1O15239 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NDUFA1O15239 C11orf96-202ENST00000528572 1834 ntBASIC15.19■□□□□ 0.02
NDUFA1O15239 AC092053.2-201ENST00000640557 1818 ntBASIC15.19■□□□□ 0.02
NDUFA1O15239 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFA1O15239 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NDUFA1O15239 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA1O15239 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA1O15239 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA1O15239 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFA1O15239 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA1O15239 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NDUFA1O15239 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NDUFA1O15239 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFA1O15239 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA1O15239 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA1O15239 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFA1O15239 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFA1O15239 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFA1O15239 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms