Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 UNC93B8-201ENST00000511903 705 ntBASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00474Q9P2X8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 AC004812.2-201ENST00000611079 2094 ntBASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00474Q9P2X8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 PKD1P6-201ENST00000343738 4769 ntBASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00474Q9P2X8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
LINC00474Q9P2X8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.46□□□□□ -0.1
LINC00474Q9P2X8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00474Q9P2X8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00474Q9P2X8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LINC00474Q9P2X8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC00474Q9P2X8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00474Q9P2X8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 AL356441.2-201ENST00000443009 864 ntBASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 RNF165-205ENST00000588679 2904 ntBASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00474Q9P2X8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00474Q9P2X8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms