Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SHF-207ENST00000560540 2062 ntTSL 5 BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDC42BPAQ5VT25 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDC42BPAQ5VT25 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDC42BPAQ5VT25 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC34.48■■■■□ 3.11
CDC42BPAQ5VT25 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC34.48■■■■□ 3.11
CDC42BPAQ5VT25 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC34.48■■■■□ 3.11
CDC42BPAQ5VT25 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC34.48■■■■□ 3.11
CDC42BPAQ5VT25 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPAQ5VT25 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPAQ5VT25 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPAQ5VT25 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPAQ5VT25 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPAQ5VT25 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPAQ5VT25 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC34.47■■■■□ 3.11
CDC42BPAQ5VT25 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPAQ5VT25 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC34.47■■■■□ 3.11
CDC42BPAQ5VT25 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPAQ5VT25 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPAQ5VT25 KRT18P61-201ENST00000585825 1298 ntBASIC34.47■■■■□ 3.11
CDC42BPAQ5VT25 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPAQ5VT25 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
CDC42BPAQ5VT25 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPAQ5VT25 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC34.46■■■■□ 3.11
CDC42BPAQ5VT25 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC34.46■■■■□ 3.11
CDC42BPAQ5VT25 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
CDC42BPAQ5VT25 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDC42BPAQ5VT25 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC34.45■■■■□ 3.11
CDC42BPAQ5VT25 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CDC42BPAQ5VT25 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC34.45■■■■□ 3.11
CDC42BPAQ5VT25 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CDC42BPAQ5VT25 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CDC42BPAQ5VT25 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CDC42BPAQ5VT25 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.43■■■■□ 3.1
CDC42BPAQ5VT25 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC34.43■■■■□ 3.1
CDC42BPAQ5VT25 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC34.43■■■■□ 3.1
CDC42BPAQ5VT25 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CDC42BPAQ5VT25 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC34.43■■■■□ 3.1
CDC42BPAQ5VT25 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC34.43■■■■□ 3.1
CDC42BPAQ5VT25 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC34.42■■■■□ 3.1
CDC42BPAQ5VT25 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC34.42■■■■□ 3.1
CDC42BPAQ5VT25 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC34.42■■■■□ 3.1
CDC42BPAQ5VT25 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CDC42BPAQ5VT25 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPAQ5VT25 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC34.41■■■■□ 3.1
CDC42BPAQ5VT25 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPAQ5VT25 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPAQ5VT25 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDC42BPAQ5VT25 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 NT5C3AP1-201ENST00000394500 1012 ntBASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 DLX3-202ENST00000512495 834 ntTSL 2 BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
CDC42BPAQ5VT25 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CDC42BPAQ5VT25 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC34.39■■■■□ 3.1
CDC42BPAQ5VT25 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC34.39■■■■□ 3.1
CDC42BPAQ5VT25 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDC42BPAQ5VT25 AC004911.1-201ENST00000416316 871 ntBASIC34.39■■■■□ 3.1
CDC42BPAQ5VT25 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC34.39■■■■□ 3.1
CDC42BPAQ5VT25 VPS53-216ENST00000574029 585 ntTSL 4 BASIC34.39■■■■□ 3.1
CDC42BPAQ5VT25 EI24-213ENST00000618552 1747 ntTSL 5 BASIC34.39■■■■□ 3.1
CDC42BPAQ5VT25 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC34.38■■■■□ 3.09
CDC42BPAQ5VT25 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
CDC42BPAQ5VT25 AC022211.4-201ENST00000625094 2161 ntBASIC34.37■■■■□ 3.09
CDC42BPAQ5VT25 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC34.37■■■■□ 3.09
CDC42BPAQ5VT25 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
CDC42BPAQ5VT25 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
CDC42BPAQ5VT25 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC34.37■■■■□ 3.09
CDC42BPAQ5VT25 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
CDC42BPAQ5VT25 AP003733.4-201ENST00000623785 1697 ntBASIC34.36■■■■□ 3.09
CDC42BPAQ5VT25 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC34.36■■■■□ 3.09
CDC42BPAQ5VT25 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC34.36■■■■□ 3.09
CDC42BPAQ5VT25 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC34.36■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms