Protein–RNA interactions for Protein: A6NJR5

Putative speedy protein-like protein 3, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A6NJR5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
A6NJR5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
A6NJR5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
A6NJR5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
A6NJR5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
A6NJR5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
A6NJR5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
A6NJR5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.1■■□□□ 1.61
A6NJR5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
A6NJR5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
A6NJR5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
A6NJR5 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.1■■□□□ 1.61
A6NJR5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
A6NJR5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.1■■□□□ 1.61
A6NJR5 AL358852.1-201ENST00000623174 1268 ntBASIC25.1■■□□□ 1.61
A6NJR5 AL031602.1-201ENST00000633169 911 ntBASIC25.1■■□□□ 1.61
A6NJR5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
A6NJR5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
A6NJR5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
A6NJR5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
A6NJR5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
A6NJR5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
A6NJR5 MIR572-201ENST00000384983 95 ntBASIC25.09■■□□□ 1.61
A6NJR5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
A6NJR5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.09■■□□□ 1.61
A6NJR5 DUX4L4-201ENST00000566884 1269 ntBASIC25.09■■□□□ 1.61
A6NJR5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.09■■□□□ 1.61
A6NJR5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
A6NJR5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
A6NJR5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
A6NJR5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.09■■□□□ 1.61
A6NJR5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
A6NJR5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
A6NJR5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
A6NJR5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.08■■□□□ 1.61
A6NJR5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
A6NJR5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
A6NJR5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.08■■□□□ 1.61
A6NJR5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
A6NJR5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.08■■□□□ 1.61
A6NJR5 AC027612.3-201ENST00000413684 1047 ntBASIC25.08■■□□□ 1.61
A6NJR5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
A6NJR5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
A6NJR5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.08■■□□□ 1.6
A6NJR5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
A6NJR5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
A6NJR5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
A6NJR5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
A6NJR5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
A6NJR5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
A6NJR5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
A6NJR5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.07■■□□□ 1.6
A6NJR5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
A6NJR5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.07■■□□□ 1.6
A6NJR5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
A6NJR5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
A6NJR5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
A6NJR5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.06■■□□□ 1.6
A6NJR5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
A6NJR5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.06■■□□□ 1.6
A6NJR5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.06■■□□□ 1.6
A6NJR5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
A6NJR5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
A6NJR5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
A6NJR5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
A6NJR5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
A6NJR5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
A6NJR5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
A6NJR5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
A6NJR5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
A6NJR5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
A6NJR5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.05■■□□□ 1.6
A6NJR5 AC142381.3-201ENST00000568208 1670 ntBASIC25.05■■□□□ 1.6
A6NJR5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.05■■□□□ 1.6
A6NJR5 AC123595.1-201ENST00000440769 1046 ntBASIC25.05■■□□□ 1.6
A6NJR5 OR2I1P-207ENST00000453522 948 ntBASIC25.05■■□□□ 1.6
A6NJR5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.05■■□□□ 1.6
A6NJR5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.05■■□□□ 1.6
A6NJR5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
A6NJR5 AC138932.3-201ENST00000567634 1902 ntBASIC25.05■■□□□ 1.6
A6NJR5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.05■■□□□ 1.6
A6NJR5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
A6NJR5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
A6NJR5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
A6NJR5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
A6NJR5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
A6NJR5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.04■■□□□ 1.6
A6NJR5 DUX4L2-201ENST00000561772 1275 ntBASIC25.04■■□□□ 1.6
A6NJR5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.04■■□□□ 1.6
A6NJR5 DUX4L6-201ENST00000626483 1275 ntBASIC25.04■■□□□ 1.6
A6NJR5 DUX4L1-201ENST00000627662 1275 ntBASIC25.04■■□□□ 1.6
A6NJR5 DUX4L8-201ENST00000629013 1275 ntBASIC25.04■■□□□ 1.6
A6NJR5 DUX4L3-201ENST00000630187 1275 ntBASIC25.04■■□□□ 1.6
A6NJR5 DUX4L7-201ENST00000630678 1275 ntBASIC25.04■■□□□ 1.6
A6NJR5 DUX4L5-201ENST00000630834 1275 ntBASIC25.04■■□□□ 1.6
A6NJR5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.04■■□□□ 1.6
A6NJR5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
A6NJR5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
A6NJR5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
A6NJR5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms