Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
VTI1AQ96AJ9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
VTI1AQ96AJ9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
VTI1AQ96AJ9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
VTI1AQ96AJ9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
VTI1AQ96AJ9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
VTI1AQ96AJ9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.55■■■□□ 2.64
VTI1AQ96AJ9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
VTI1AQ96AJ9 AL162393.1-201ENST00000437852 946 ntBASIC31.54■■■□□ 2.64
VTI1AQ96AJ9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VTI1AQ96AJ9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VTI1AQ96AJ9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.53■■■□□ 2.64
VTI1AQ96AJ9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
VTI1AQ96AJ9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
VTI1AQ96AJ9 AL391121.1-201ENST00000607967 1349 ntBASIC31.51■■■□□ 2.64
VTI1AQ96AJ9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
VTI1AQ96AJ9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
VTI1AQ96AJ9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
VTI1AQ96AJ9 AP006261.1-201ENST00000584783 668 ntBASIC31.48■■■□□ 2.63
VTI1AQ96AJ9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
VTI1AQ96AJ9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
VTI1AQ96AJ9 AL133380.1-201ENST00000506013 324 ntBASIC31.44■■■□□ 2.62
VTI1AQ96AJ9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.44■■■□□ 2.62
VTI1AQ96AJ9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.42■■■□□ 2.62
VTI1AQ96AJ9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
VTI1AQ96AJ9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
VTI1AQ96AJ9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.38■■■□□ 2.61
VTI1AQ96AJ9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VTI1AQ96AJ9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.38■■■□□ 2.61
VTI1AQ96AJ9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
VTI1AQ96AJ9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.37■■■□□ 2.61
VTI1AQ96AJ9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
VTI1AQ96AJ9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
VTI1AQ96AJ9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
VTI1AQ96AJ9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.34■■■□□ 2.61
VTI1AQ96AJ9 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.34■■■□□ 2.61
VTI1AQ96AJ9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
VTI1AQ96AJ9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.32■■■□□ 2.6
VTI1AQ96AJ9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.32■■■□□ 2.6
VTI1AQ96AJ9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
VTI1AQ96AJ9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
VTI1AQ96AJ9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
VTI1AQ96AJ9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.3■■■□□ 2.6
VTI1AQ96AJ9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.27■■■□□ 2.6
VTI1AQ96AJ9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
VTI1AQ96AJ9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
VTI1AQ96AJ9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
VTI1AQ96AJ9 MIR3665-201ENST00000578708 105 ntBASIC31.24■■■□□ 2.59
VTI1AQ96AJ9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
VTI1AQ96AJ9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.2■■■□□ 2.59
VTI1AQ96AJ9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.2■■■□□ 2.59
VTI1AQ96AJ9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.19■■■□□ 2.58
VTI1AQ96AJ9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
VTI1AQ96AJ9 ABHD17AP4-201ENST00000411545 909 ntBASIC31.15■■■□□ 2.58
VTI1AQ96AJ9 MIR7108-201ENST00000614319 87 ntBASIC31.13■■■□□ 2.57
VTI1AQ96AJ9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
VTI1AQ96AJ9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
VTI1AQ96AJ9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.12■■■□□ 2.57
VTI1AQ96AJ9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
VTI1AQ96AJ9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
VTI1AQ96AJ9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.09■■■□□ 2.57
VTI1AQ96AJ9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
VTI1AQ96AJ9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
VTI1AQ96AJ9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
VTI1AQ96AJ9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VTI1AQ96AJ9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
VTI1AQ96AJ9 AC087741.3-201ENST00000624270 1347 ntBASIC31.06■■■□□ 2.56
VTI1AQ96AJ9 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.06■■■□□ 2.56
VTI1AQ96AJ9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.04■■■□□ 2.56
VTI1AQ96AJ9 DUX4L28-201ENST00000623687 678 ntBASIC31.04■■■□□ 2.56
VTI1AQ96AJ9 MIR762-201ENST00000390236 83 ntBASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.02■■■□□ 2.56
VTI1AQ96AJ9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
VTI1AQ96AJ9 AC005559.1-201ENST00000589661 871 ntBASIC30.99■■■□□ 2.55
VTI1AQ96AJ9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VTI1AQ96AJ9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VTI1AQ96AJ9 AC044849.2-201ENST00000606596 710 ntBASIC30.98■■■□□ 2.55
VTI1AQ96AJ9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
VTI1AQ96AJ9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
VTI1AQ96AJ9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
VTI1AQ96AJ9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.97■■■□□ 2.55
VTI1AQ96AJ9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VTI1AQ96AJ9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.95■■■□□ 2.55
VTI1AQ96AJ9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.95■■■□□ 2.55
VTI1AQ96AJ9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.93■■■□□ 2.54
VTI1AQ96AJ9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VTI1AQ96AJ9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
VTI1AQ96AJ9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VTI1AQ96AJ9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.89■■■□□ 2.54
VTI1AQ96AJ9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
VTI1AQ96AJ9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
VTI1AQ96AJ9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
VTI1AQ96AJ9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.88■■■□□ 2.53
VTI1AQ96AJ9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
VTI1AQ96AJ9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
VTI1AQ96AJ9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms