Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.09■■□□□ 1.13
LINC01006Q8NI28 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LINC01006Q8NI28 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LINC01006Q8NI28 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
LINC01006Q8NI28 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.04■■□□□ 1.12
LINC01006Q8NI28 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.03■■□□□ 1.12
LINC01006Q8NI28 AL162393.1-201ENST00000437852 946 ntBASIC22.02■■□□□ 1.12
LINC01006Q8NI28 AP006261.1-201ENST00000584783 668 ntBASIC22.02■■□□□ 1.12
LINC01006Q8NI28 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LINC01006Q8NI28 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LINC01006Q8NI28 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
LINC01006Q8NI28 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22■■□□□ 1.11
LINC01006Q8NI28 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.99■■□□□ 1.11
LINC01006Q8NI28 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.98■■□□□ 1.11
LINC01006Q8NI28 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINC01006Q8NI28 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINC01006Q8NI28 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC01006Q8NI28 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.97■■□□□ 1.11
LINC01006Q8NI28 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
LINC01006Q8NI28 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
LINC01006Q8NI28 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC01006Q8NI28 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC01006Q8NI28 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.94■■□□□ 1.1
LINC01006Q8NI28 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LINC01006Q8NI28 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC01006Q8NI28 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.94■■□□□ 1.1
LINC01006Q8NI28 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC01006Q8NI28 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01006Q8NI28 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01006Q8NI28 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
LINC01006Q8NI28 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01006Q8NI28 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01006Q8NI28 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01006Q8NI28 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.92■■□□□ 1.1
LINC01006Q8NI28 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01006Q8NI28 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01006Q8NI28 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.89■■□□□ 1.09
LINC01006Q8NI28 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01006Q8NI28 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01006Q8NI28 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01006Q8NI28 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01006Q8NI28 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
LINC01006Q8NI28 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.85■■□□□ 1.09
LINC01006Q8NI28 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
LINC01006Q8NI28 MIR3665-201ENST00000578708 105 ntBASIC21.84■■□□□ 1.09
LINC01006Q8NI28 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01006Q8NI28 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC01006Q8NI28 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC01006Q8NI28 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LINC01006Q8NI28 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.81■■□□□ 1.08
LINC01006Q8NI28 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC01006Q8NI28 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01006Q8NI28 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01006Q8NI28 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LINC01006Q8NI28 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.79■■□□□ 1.08
LINC01006Q8NI28 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC01006Q8NI28 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.78■■□□□ 1.08
LINC01006Q8NI28 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC01006Q8NI28 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01006Q8NI28 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.77■■□□□ 1.08
LINC01006Q8NI28 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LINC01006Q8NI28 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.76■■□□□ 1.07
LINC01006Q8NI28 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LINC01006Q8NI28 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LINC01006Q8NI28 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC21.74■■□□□ 1.07
LINC01006Q8NI28 MIR762-201ENST00000390236 83 ntBASIC21.74■■□□□ 1.07
LINC01006Q8NI28 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.74■■□□□ 1.07
LINC01006Q8NI28 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC01006Q8NI28 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01006Q8NI28 DUX4L28-201ENST00000623687 678 ntBASIC21.73■■□□□ 1.07
LINC01006Q8NI28 AC087741.3-201ENST00000624270 1347 ntBASIC21.73■■□□□ 1.07
LINC01006Q8NI28 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.7■■□□□ 1.06
LINC01006Q8NI28 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.69■■□□□ 1.06
LINC01006Q8NI28 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.69■■□□□ 1.06
LINC01006Q8NI28 AC005559.1-201ENST00000589661 871 ntBASIC21.68■■□□□ 1.06
LINC01006Q8NI28 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LINC01006Q8NI28 ABHD17AP4-201ENST00000411545 909 ntBASIC21.67■■□□□ 1.06
LINC01006Q8NI28 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01006Q8NI28 AC044849.2-201ENST00000606596 710 ntBASIC21.65■■□□□ 1.06
LINC01006Q8NI28 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01006Q8NI28 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
LINC01006Q8NI28 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.64■■□□□ 1.05
LINC01006Q8NI28 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01006Q8NI28 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.63■■□□□ 1.05
LINC01006Q8NI28 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
LINC01006Q8NI28 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC01006Q8NI28 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.62■■□□□ 1.05
LINC01006Q8NI28 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.62■■□□□ 1.05
LINC01006Q8NI28 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.61■■□□□ 1.05
LINC01006Q8NI28 MIR7108-201ENST00000614319 87 ntBASIC21.61■■□□□ 1.05
LINC01006Q8NI28 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01006Q8NI28 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LINC01006Q8NI28 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01006Q8NI28 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01006Q8NI28 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LINC01006Q8NI28 WASH5P-204ENST00000632292 975 ntBASIC21.58■■□□□ 1.05
LINC01006Q8NI28 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
LINC01006Q8NI28 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01006Q8NI28 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC01006Q8NI28 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms