Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
EXD3Q8N9H8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.36■■□□□ 1.81
EXD3Q8N9H8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
EXD3Q8N9H8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
EXD3Q8N9H8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.35■■□□□ 1.81
EXD3Q8N9H8 MIR7108-201ENST00000614319 87 ntBASIC26.34■■□□□ 1.81
EXD3Q8N9H8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
EXD3Q8N9H8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
EXD3Q8N9H8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
EXD3Q8N9H8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
EXD3Q8N9H8 ABHD17AP4-201ENST00000411545 909 ntBASIC26.31■■□□□ 1.8
EXD3Q8N9H8 AL391121.1-201ENST00000607967 1349 ntBASIC26.31■■□□□ 1.8
EXD3Q8N9H8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
EXD3Q8N9H8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
EXD3Q8N9H8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
EXD3Q8N9H8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
EXD3Q8N9H8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
EXD3Q8N9H8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
EXD3Q8N9H8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
EXD3Q8N9H8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
EXD3Q8N9H8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.23■■□□□ 1.79
EXD3Q8N9H8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.22■■□□□ 1.79
EXD3Q8N9H8 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.2■■□□□ 1.79
EXD3Q8N9H8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
EXD3Q8N9H8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
EXD3Q8N9H8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
EXD3Q8N9H8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
EXD3Q8N9H8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.18■■□□□ 1.78
EXD3Q8N9H8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
EXD3Q8N9H8 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.16■■□□□ 1.78
EXD3Q8N9H8 AC145285.7-201ENST00000614819 1539 ntBASIC26.15■■□□□ 1.78
EXD3Q8N9H8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
EXD3Q8N9H8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
EXD3Q8N9H8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.13■■□□□ 1.77
EXD3Q8N9H8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.13■■□□□ 1.77
EXD3Q8N9H8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
EXD3Q8N9H8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
EXD3Q8N9H8 MIR3665-201ENST00000578708 105 ntBASIC26.12■■□□□ 1.77
EXD3Q8N9H8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.11■■□□□ 1.77
EXD3Q8N9H8 AL133380.1-201ENST00000506013 324 ntBASIC26.11■■□□□ 1.77
EXD3Q8N9H8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.11■■□□□ 1.77
EXD3Q8N9H8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.1■■□□□ 1.77
EXD3Q8N9H8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
EXD3Q8N9H8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.1■■□□□ 1.77
EXD3Q8N9H8 HLA-V-202ENST00000446817 847 ntBASIC26.09■■□□□ 1.77
EXD3Q8N9H8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
EXD3Q8N9H8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
EXD3Q8N9H8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
EXD3Q8N9H8 AC087741.3-201ENST00000624270 1347 ntBASIC26.06■■□□□ 1.76
EXD3Q8N9H8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.05■■□□□ 1.76
EXD3Q8N9H8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.04■■□□□ 1.76
EXD3Q8N9H8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
EXD3Q8N9H8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
EXD3Q8N9H8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26■■□□□ 1.75
EXD3Q8N9H8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
EXD3Q8N9H8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
EXD3Q8N9H8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.98■■□□□ 1.75
EXD3Q8N9H8 DUX4L28-201ENST00000623687 678 ntBASIC25.98■■□□□ 1.75
EXD3Q8N9H8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.96■■□□□ 1.75
EXD3Q8N9H8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.95■■□□□ 1.74
EXD3Q8N9H8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
EXD3Q8N9H8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
EXD3Q8N9H8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
EXD3Q8N9H8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
EXD3Q8N9H8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
EXD3Q8N9H8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
EXD3Q8N9H8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.89■■□□□ 1.74
EXD3Q8N9H8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
EXD3Q8N9H8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
EXD3Q8N9H8 AC044849.2-201ENST00000606596 710 ntBASIC25.89■■□□□ 1.74
EXD3Q8N9H8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
EXD3Q8N9H8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
EXD3Q8N9H8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.87■■□□□ 1.73
EXD3Q8N9H8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.87■■□□□ 1.73
EXD3Q8N9H8 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.87■■□□□ 1.73
EXD3Q8N9H8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
EXD3Q8N9H8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.86■■□□□ 1.73
EXD3Q8N9H8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
EXD3Q8N9H8 MIR762-201ENST00000390236 83 ntBASIC25.84■■□□□ 1.73
EXD3Q8N9H8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
EXD3Q8N9H8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
EXD3Q8N9H8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.82■■□□□ 1.72
EXD3Q8N9H8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.82■■□□□ 1.72
EXD3Q8N9H8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
EXD3Q8N9H8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
EXD3Q8N9H8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.8■■□□□ 1.72
EXD3Q8N9H8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.8■■□□□ 1.72
EXD3Q8N9H8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.8■■□□□ 1.72
EXD3Q8N9H8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
EXD3Q8N9H8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
EXD3Q8N9H8 ZNRF2P2-203ENST00000454624 420 ntBASIC25.79■■□□□ 1.72
EXD3Q8N9H8 AC005559.1-201ENST00000589661 871 ntBASIC25.79■■□□□ 1.72
EXD3Q8N9H8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.78■■□□□ 1.72
EXD3Q8N9H8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
EXD3Q8N9H8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
EXD3Q8N9H8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.75■■□□□ 1.71
EXD3Q8N9H8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.75■■□□□ 1.71
EXD3Q8N9H8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
EXD3Q8N9H8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.74■■□□□ 1.71
EXD3Q8N9H8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms