Protein–RNA interactions for Protein: O60671

RAD1, Cell cycle checkpoint protein RAD1, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1O60671 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAD1O60671 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAD1O60671 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAD1O60671 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.54■■□□□ 1.84
RAD1O60671 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RAD1O60671 AL391121.1-201ENST00000607967 1349 ntBASIC26.53■■□□□ 1.84
RAD1O60671 AL133380.1-201ENST00000506013 324 ntBASIC26.52■■□□□ 1.84
RAD1O60671 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAD1O60671 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.5■■□□□ 1.83
RAD1O60671 AL162393.1-201ENST00000437852 946 ntBASIC26.46■■□□□ 1.83
RAD1O60671 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.45■■□□□ 1.82
RAD1O60671 AP006261.1-201ENST00000584783 668 ntBASIC26.45■■□□□ 1.82
RAD1O60671 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.44■■□□□ 1.82
RAD1O60671 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.44■■□□□ 1.82
RAD1O60671 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.43■■□□□ 1.82
RAD1O60671 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
RAD1O60671 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RAD1O60671 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.4■■□□□ 1.82
RAD1O60671 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAD1O60671 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
RAD1O60671 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAD1O60671 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
RAD1O60671 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
RAD1O60671 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAD1O60671 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAD1O60671 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.35■■□□□ 1.81
RAD1O60671 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.35■■□□□ 1.81
RAD1O60671 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAD1O60671 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.34■■□□□ 1.81
RAD1O60671 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RAD1O60671 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAD1O60671 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RAD1O60671 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RAD1O60671 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RAD1O60671 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RAD1O60671 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.32■■□□□ 1.8
RAD1O60671 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.31■■□□□ 1.8
RAD1O60671 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.31■■□□□ 1.8
RAD1O60671 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RAD1O60671 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAD1O60671 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.3■■□□□ 1.8
RAD1O60671 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAD1O60671 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RAD1O60671 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAD1O60671 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAD1O60671 MIR3665-201ENST00000578708 105 ntBASIC26.23■■□□□ 1.79
RAD1O60671 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAD1O60671 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RAD1O60671 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.22■■□□□ 1.79
RAD1O60671 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
RAD1O60671 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.21■■□□□ 1.79
RAD1O60671 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RAD1O60671 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.2■■□□□ 1.78
RAD1O60671 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.2■■□□□ 1.78
RAD1O60671 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAD1O60671 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
RAD1O60671 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RAD1O60671 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.16■■□□□ 1.78
RAD1O60671 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RAD1O60671 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RAD1O60671 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.14■■□□□ 1.78
RAD1O60671 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
RAD1O60671 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RAD1O60671 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RAD1O60671 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RAD1O60671 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.11■■□□□ 1.77
RAD1O60671 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.11■■□□□ 1.77
RAD1O60671 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RAD1O60671 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAD1O60671 DUX4L28-201ENST00000623687 678 ntBASIC26.1■■□□□ 1.77
RAD1O60671 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAD1O60671 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RAD1O60671 MIR762-201ENST00000390236 83 ntBASIC26.09■■□□□ 1.77
RAD1O60671 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.09■■□□□ 1.77
RAD1O60671 AC087741.3-201ENST00000624270 1347 ntBASIC26.09■■□□□ 1.77
RAD1O60671 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.06■■□□□ 1.76
RAD1O60671 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
RAD1O60671 AC005559.1-201ENST00000589661 871 ntBASIC26.03■■□□□ 1.76
RAD1O60671 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
RAD1O60671 ABHD17AP4-201ENST00000411545 909 ntBASIC26.02■■□□□ 1.76
RAD1O60671 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.01■■□□□ 1.75
RAD1O60671 AC044849.2-201ENST00000606596 710 ntBASIC26■■□□□ 1.75
RAD1O60671 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RAD1O60671 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
RAD1O60671 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RAD1O60671 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
RAD1O60671 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.99■■□□□ 1.75
RAD1O60671 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.99■■□□□ 1.75
RAD1O60671 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RAD1O60671 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.98■■□□□ 1.75
RAD1O60671 MIR7108-201ENST00000614319 87 ntBASIC25.98■■□□□ 1.75
RAD1O60671 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.97■■□□□ 1.75
RAD1O60671 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
RAD1O60671 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.96■■□□□ 1.75
RAD1O60671 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
RAD1O60671 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.94■■□□□ 1.74
RAD1O60671 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAD1O60671 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RAD1O60671 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RAD1O60671 WASH5P-204ENST00000632292 975 ntBASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms