Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
NTN3O00634 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
NTN3O00634 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
NTN3O00634 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
NTN3O00634 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.01■■□□□ 1.91
NTN3O00634 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NTN3O00634 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NTN3O00634 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.96■■□□□ 1.91
NTN3O00634 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NTN3O00634 AL162393.1-201ENST00000437852 946 ntBASIC26.94■■□□□ 1.9
NTN3O00634 AP006261.1-201ENST00000584783 668 ntBASIC26.93■■□□□ 1.9
NTN3O00634 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.92■■□□□ 1.9
NTN3O00634 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.92■■□□□ 1.9
NTN3O00634 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.92■■□□□ 1.9
NTN3O00634 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
NTN3O00634 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NTN3O00634 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NTN3O00634 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NTN3O00634 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NTN3O00634 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NTN3O00634 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.86■■□□□ 1.89
NTN3O00634 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
NTN3O00634 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.85■■□□□ 1.89
NTN3O00634 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.84■■□□□ 1.89
NTN3O00634 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.84■■□□□ 1.89
NTN3O00634 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NTN3O00634 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.83■■□□□ 1.89
NTN3O00634 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NTN3O00634 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NTN3O00634 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NTN3O00634 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NTN3O00634 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NTN3O00634 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NTN3O00634 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
NTN3O00634 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
NTN3O00634 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
NTN3O00634 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NTN3O00634 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.77■■□□□ 1.88
NTN3O00634 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NTN3O00634 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
NTN3O00634 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
NTN3O00634 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.74■■□□□ 1.87
NTN3O00634 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.73■■□□□ 1.87
NTN3O00634 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NTN3O00634 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NTN3O00634 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.7■■□□□ 1.86
NTN3O00634 MIR3665-201ENST00000578708 105 ntBASIC26.7■■□□□ 1.86
NTN3O00634 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NTN3O00634 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NTN3O00634 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
NTN3O00634 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
NTN3O00634 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
NTN3O00634 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.68■■□□□ 1.86
NTN3O00634 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.67■■□□□ 1.86
NTN3O00634 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
NTN3O00634 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
NTN3O00634 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
NTN3O00634 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NTN3O00634 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
NTN3O00634 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.63■■□□□ 1.85
NTN3O00634 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.62■■□□□ 1.85
NTN3O00634 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.62■■□□□ 1.85
NTN3O00634 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NTN3O00634 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NTN3O00634 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.6■■□□□ 1.85
NTN3O00634 DUX4L28-201ENST00000623687 678 ntBASIC26.6■■□□□ 1.85
NTN3O00634 MIR762-201ENST00000390236 83 ntBASIC26.59■■□□□ 1.85
NTN3O00634 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.59■■□□□ 1.85
NTN3O00634 AC087741.3-201ENST00000624270 1347 ntBASIC26.59■■□□□ 1.85
NTN3O00634 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NTN3O00634 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.58■■□□□ 1.85
NTN3O00634 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
NTN3O00634 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.51■■□□□ 1.83
NTN3O00634 AC005559.1-201ENST00000589661 871 ntBASIC26.51■■□□□ 1.83
NTN3O00634 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NTN3O00634 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.49■■□□□ 1.83
NTN3O00634 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.49■■□□□ 1.83
NTN3O00634 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NTN3O00634 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NTN3O00634 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.48■■□□□ 1.83
NTN3O00634 ABHD17AP4-201ENST00000411545 909 ntBASIC26.47■■□□□ 1.83
NTN3O00634 AC044849.2-201ENST00000606596 710 ntBASIC26.46■■□□□ 1.83
NTN3O00634 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NTN3O00634 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
NTN3O00634 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
NTN3O00634 WASH5P-204ENST00000632292 975 ntBASIC26.44■■□□□ 1.82
NTN3O00634 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NTN3O00634 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NTN3O00634 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.43■■□□□ 1.82
NTN3O00634 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.43■■□□□ 1.82
NTN3O00634 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
NTN3O00634 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
NTN3O00634 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.42■■□□□ 1.82
NTN3O00634 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
NTN3O00634 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
NTN3O00634 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
NTN3O00634 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NTN3O00634 MIR7108-201ENST00000614319 87 ntBASIC26.38■■□□□ 1.81
NTN3O00634 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NTN3O00634 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms