Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LST1O00453 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LST1O00453 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LST1O00453 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LST1O00453 AC145285.7-201ENST00000614819 1539 ntBASIC18.33■□□□□ 0.52
LST1O00453 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LST1O00453 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LST1O00453 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LST1O00453 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LST1O00453 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
LST1O00453 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LST1O00453 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LST1O00453 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LST1O00453 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LST1O00453 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LST1O00453 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LST1O00453 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LST1O00453 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LST1O00453 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LST1O00453 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LST1O00453 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LST1O00453 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LST1O00453 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LST1O00453 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LST1O00453 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LST1O00453 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LST1O00453 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LST1O00453 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LST1O00453 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LST1O00453 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LST1O00453 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LST1O00453 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.12■□□□□ 0.49
LST1O00453 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LST1O00453 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LST1O00453 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LST1O00453 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LST1O00453 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LST1O00453 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.09■□□□□ 0.49
LST1O00453 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.08■□□□□ 0.49
LST1O00453 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LST1O00453 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LST1O00453 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LST1O00453 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LST1O00453 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LST1O00453 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LST1O00453 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LST1O00453 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LST1O00453 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
LST1O00453 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LST1O00453 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LST1O00453 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.05■□□□□ 0.48
LST1O00453 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LST1O00453 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LST1O00453 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LST1O00453 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LST1O00453 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LST1O00453 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
LST1O00453 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LST1O00453 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.01■□□□□ 0.47
LST1O00453 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LST1O00453 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LST1O00453 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LST1O00453 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LST1O00453 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LST1O00453 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LST1O00453 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
LST1O00453 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LST1O00453 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18■□□□□ 0.47
LST1O00453 AC135731.1-201ENST00000569415 2548 ntBASIC18■□□□□ 0.47
LST1O00453 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LST1O00453 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LST1O00453 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LST1O00453 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.98■□□□□ 0.47
LST1O00453 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LST1O00453 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LST1O00453 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
LST1O00453 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LST1O00453 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.94■□□□□ 0.46
LST1O00453 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LST1O00453 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LST1O00453 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LST1O00453 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LST1O00453 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LST1O00453 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.93■□□□□ 0.46
LST1O00453 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC17.93■□□□□ 0.46
LST1O00453 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LST1O00453 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LST1O00453 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LST1O00453 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LST1O00453 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LST1O00453 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC17.91■□□□□ 0.46
LST1O00453 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LST1O00453 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.9■□□□□ 0.46
LST1O00453 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LST1O00453 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LST1O00453 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LST1O00453 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LST1O00453 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LST1O00453 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
LST1O00453 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 1213.9 ms