Protein–RNA interactions for Protein: A2VEC9

SSPO, SCO-spondin, humanhuman

Predictions only

Length 5,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSPOA2VEC9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSPOA2VEC9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SSPOA2VEC9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSPOA2VEC9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC12.97□□□□□ -0.33
SSPOA2VEC9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC12.97□□□□□ -0.33
SSPOA2VEC9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSPOA2VEC9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC12.96□□□□□ -0.33
SSPOA2VEC9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSPOA2VEC9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSPOA2VEC9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSPOA2VEC9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSPOA2VEC9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SSPOA2VEC9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SSPOA2VEC9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC12.92□□□□□ -0.34
SSPOA2VEC9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC12.91□□□□□ -0.34
SSPOA2VEC9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC12.91□□□□□ -0.34
SSPOA2VEC9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSPOA2VEC9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
SSPOA2VEC9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC12.9□□□□□ -0.34
SSPOA2VEC9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC12.9□□□□□ -0.34
SSPOA2VEC9 DUX4L28-201ENST00000623687 678 ntBASIC12.9□□□□□ -0.34
SSPOA2VEC9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC12.89□□□□□ -0.35
SSPOA2VEC9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC12.88□□□□□ -0.35
SSPOA2VEC9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSPOA2VEC9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSPOA2VEC9 MIR639-201ENST00000384974 98 ntBASIC12.88□□□□□ -0.35
SSPOA2VEC9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSPOA2VEC9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC12.87□□□□□ -0.35
SSPOA2VEC9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SSPOA2VEC9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSPOA2VEC9 ZNRF2P2-203ENST00000454624 420 ntBASIC12.84□□□□□ -0.35
SSPOA2VEC9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC12.84□□□□□ -0.35
SSPOA2VEC9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SSPOA2VEC9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSPOA2VEC9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSPOA2VEC9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC12.81□□□□□ -0.36
SSPOA2VEC9 MIR762-201ENST00000390236 83 ntBASIC12.81□□□□□ -0.36
SSPOA2VEC9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSPOA2VEC9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SSPOA2VEC9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC12.79□□□□□ -0.36
SSPOA2VEC9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC12.79□□□□□ -0.36
SSPOA2VEC9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSPOA2VEC9 AC044849.2-201ENST00000606596 710 ntBASIC12.78□□□□□ -0.36
SSPOA2VEC9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC12.77□□□□□ -0.36
SSPOA2VEC9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC12.76□□□□□ -0.37
SSPOA2VEC9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSPOA2VEC9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSPOA2VEC9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC12.75□□□□□ -0.37
SSPOA2VEC9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC12.75□□□□□ -0.37
SSPOA2VEC9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSPOA2VEC9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSPOA2VEC9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC12.75□□□□□ -0.37
SSPOA2VEC9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSPOA2VEC9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC12.74□□□□□ -0.37
SSPOA2VEC9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSPOA2VEC9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSPOA2VEC9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSPOA2VEC9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSPOA2VEC9 AL133380.1-201ENST00000506013 324 ntBASIC12.72□□□□□ -0.37
SSPOA2VEC9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC12.72□□□□□ -0.37
SSPOA2VEC9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSPOA2VEC9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSPOA2VEC9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC12.7□□□□□ -0.38
SSPOA2VEC9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.7□□□□□ -0.38
SSPOA2VEC9 AC145285.7-201ENST00000614819 1539 ntBASIC12.69□□□□□ -0.38
SSPOA2VEC9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSPOA2VEC9 ABHD17AP3-201ENST00000503096 1137 ntBASIC12.68□□□□□ -0.38
SSPOA2VEC9 AC005559.1-201ENST00000589661 871 ntBASIC12.68□□□□□ -0.38
SSPOA2VEC9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSPOA2VEC9 CHML-205ENST00000638160 705 ntTSL 3 BASIC12.67□□□□□ -0.38
SSPOA2VEC9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC12.66□□□□□ -0.38
SSPOA2VEC9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSPOA2VEC9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSPOA2VEC9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC12.65□□□□□ -0.38
SSPOA2VEC9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SSPOA2VEC9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSPOA2VEC9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SSPOA2VEC9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC12.65□□□□□ -0.39
SSPOA2VEC9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SSPOA2VEC9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSPOA2VEC9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SSPOA2VEC9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC12.63□□□□□ -0.39
SSPOA2VEC9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SSPOA2VEC9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC12.63□□□□□ -0.39
SSPOA2VEC9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSPOA2VEC9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC12.62□□□□□ -0.39
SSPOA2VEC9 MIR3648-2-201ENST00000581792 180 ntBASIC12.62□□□□□ -0.39
SSPOA2VEC9 MIR3648-1-201ENST00000615959 180 ntBASIC12.62□□□□□ -0.39
SSPOA2VEC9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSPOA2VEC9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSPOA2VEC9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SSPOA2VEC9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC12.61□□□□□ -0.39
SSPOA2VEC9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SSPOA2VEC9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC12.61□□□□□ -0.39
SSPOA2VEC9 CR559946.2-201ENST00000623684 991 ntBASIC12.61□□□□□ -0.39
SSPOA2VEC9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
SSPOA2VEC9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSPOA2VEC9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSPOA2VEC9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC12.59□□□□□ -0.39
SSPOA2VEC9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms