Protein–RNA interactions for Protein: A0A0C4DFX4

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 3,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A0C4DFX4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
A0A0C4DFX4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.42■■■□□ 2.46
A0A0C4DFX4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
A0A0C4DFX4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
A0A0C4DFX4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.4■■■□□ 2.46
A0A0C4DFX4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
A0A0C4DFX4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
A0A0C4DFX4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
A0A0C4DFX4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
A0A0C4DFX4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
A0A0C4DFX4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
A0A0C4DFX4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.31■■■□□ 2.44
A0A0C4DFX4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.31■■■□□ 2.44
A0A0C4DFX4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.29■■■□□ 2.44
A0A0C4DFX4 AC044849.2-201ENST00000606596 710 ntBASIC30.29■■■□□ 2.44
A0A0C4DFX4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
A0A0C4DFX4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
A0A0C4DFX4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
A0A0C4DFX4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
A0A0C4DFX4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.26■■■□□ 2.43
A0A0C4DFX4 MIR639-201ENST00000384974 98 ntBASIC30.26■■■□□ 2.43
A0A0C4DFX4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
A0A0C4DFX4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
A0A0C4DFX4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.19■■■□□ 2.42
A0A0C4DFX4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
A0A0C4DFX4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.19■■■□□ 2.42
A0A0C4DFX4 DUX4L28-201ENST00000623687 678 ntBASIC30.17■■■□□ 2.42
A0A0C4DFX4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
A0A0C4DFX4 ZNRF2P2-203ENST00000454624 420 ntBASIC30.16■■■□□ 2.42
A0A0C4DFX4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
A0A0C4DFX4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.16■■■□□ 2.42
A0A0C4DFX4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
A0A0C4DFX4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.14■■■□□ 2.42
A0A0C4DFX4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.14■■■□□ 2.42
A0A0C4DFX4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.14■■■□□ 2.41
A0A0C4DFX4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
A0A0C4DFX4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.1■■■□□ 2.41
A0A0C4DFX4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
A0A0C4DFX4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
A0A0C4DFX4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.07■■■□□ 2.4
A0A0C4DFX4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
A0A0C4DFX4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.04■■■□□ 2.4
A0A0C4DFX4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.03■■■□□ 2.4
A0A0C4DFX4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.03■■■□□ 2.4
A0A0C4DFX4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
A0A0C4DFX4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
A0A0C4DFX4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
A0A0C4DFX4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
A0A0C4DFX4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.91■■■□□ 2.38
A0A0C4DFX4 AC005559.1-201ENST00000589661 871 ntBASIC29.9■■■□□ 2.38
A0A0C4DFX4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
A0A0C4DFX4 MIR762-201ENST00000390236 83 ntBASIC29.9■■■□□ 2.38
A0A0C4DFX4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
A0A0C4DFX4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.88■■■□□ 2.37
A0A0C4DFX4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.87■■■□□ 2.37
A0A0C4DFX4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
A0A0C4DFX4 MIR3648-2-201ENST00000581792 180 ntBASIC29.85■■■□□ 2.37
A0A0C4DFX4 MIR3648-1-201ENST00000615959 180 ntBASIC29.85■■■□□ 2.37
A0A0C4DFX4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.84■■■□□ 2.37
A0A0C4DFX4 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.83■■■□□ 2.37
A0A0C4DFX4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.81■■■□□ 2.36
A0A0C4DFX4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
A0A0C4DFX4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.8■■■□□ 2.36
A0A0C4DFX4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.8■■■□□ 2.36
A0A0C4DFX4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
A0A0C4DFX4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.78■■■□□ 2.36
A0A0C4DFX4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
A0A0C4DFX4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
A0A0C4DFX4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
A0A0C4DFX4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.75■■■□□ 2.35
A0A0C4DFX4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
A0A0C4DFX4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
A0A0C4DFX4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
A0A0C4DFX4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
A0A0C4DFX4 AC016575.1-201ENST00000607026 382 ntBASIC29.69■■■□□ 2.34
A0A0C4DFX4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
A0A0C4DFX4 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.67■■■□□ 2.34
A0A0C4DFX4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
A0A0C4DFX4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
A0A0C4DFX4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
A0A0C4DFX4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
A0A0C4DFX4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
A0A0C4DFX4 AL133380.1-201ENST00000506013 324 ntBASIC29.65■■■□□ 2.34
A0A0C4DFX4 RARRES2P2-201ENST00000394842 485 ntBASIC29.61■■■□□ 2.33
A0A0C4DFX4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.6■■■□□ 2.33
A0A0C4DFX4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
A0A0C4DFX4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
A0A0C4DFX4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
A0A0C4DFX4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.58■■■□□ 2.33
A0A0C4DFX4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
A0A0C4DFX4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
A0A0C4DFX4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
A0A0C4DFX4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.57■■■□□ 2.32
A0A0C4DFX4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
A0A0C4DFX4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.55■■■□□ 2.32
A0A0C4DFX4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.55■■■□□ 2.32
A0A0C4DFX4 AC145285.7-201ENST00000614819 1539 ntBASIC29.54■■■□□ 2.32
A0A0C4DFX4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.53■■■□□ 2.32
A0A0C4DFX4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
A0A0C4DFX4 AC019069.1-201ENST00000610008 1333 ntBASIC29.51■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms