Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNAI2O43623 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNAI2O43623 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SNAI2O43623 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNAI2O43623 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNAI2O43623 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.69■□□□□ 0.26
SNAI2O43623 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.69■□□□□ 0.26
SNAI2O43623 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.69■□□□□ 0.26
SNAI2O43623 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SNAI2O43623 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
SNAI2O43623 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SNAI2O43623 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.69■□□□□ 0.26
SNAI2O43623 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.69■□□□□ 0.26
SNAI2O43623 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.69■□□□□ 0.26
SNAI2O43623 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNAI2O43623 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SNAI2O43623 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.68■□□□□ 0.26
SNAI2O43623 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.68■□□□□ 0.26
SNAI2O43623 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SNAI2O43623 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.68■□□□□ 0.26
SNAI2O43623 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNAI2O43623 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNAI2O43623 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNAI2O43623 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SNAI2O43623 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
SNAI2O43623 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.67■□□□□ 0.26
SNAI2O43623 RNF165-205ENST00000588679 2904 ntBASIC16.67■□□□□ 0.26
SNAI2O43623 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
SNAI2O43623 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNAI2O43623 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.67■□□□□ 0.26
SNAI2O43623 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.67■□□□□ 0.26
SNAI2O43623 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.67■□□□□ 0.26
SNAI2O43623 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNAI2O43623 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SNAI2O43623 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.67■□□□□ 0.26
SNAI2O43623 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNAI2O43623 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNAI2O43623 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNAI2O43623 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNAI2O43623 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNAI2O43623 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNAI2O43623 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNAI2O43623 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SNAI2O43623 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.66■□□□□ 0.26
SNAI2O43623 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SNAI2O43623 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.66■□□□□ 0.26
SNAI2O43623 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.66■□□□□ 0.26
SNAI2O43623 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SNAI2O43623 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SNAI2O43623 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SNAI2O43623 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNAI2O43623 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNAI2O43623 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SNAI2O43623 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNAI2O43623 LINC00526-201ENST00000581067 1875 ntBASIC16.65■□□□□ 0.26
SNAI2O43623 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNAI2O43623 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNAI2O43623 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.65■□□□□ 0.26
SNAI2O43623 MIR639-201ENST00000384974 98 ntBASIC16.65■□□□□ 0.26
SNAI2O43623 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.65■□□□□ 0.26
SNAI2O43623 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.65■□□□□ 0.26
SNAI2O43623 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.65■□□□□ 0.26
SNAI2O43623 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.65■□□□□ 0.26
SNAI2O43623 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SNAI2O43623 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNAI2O43623 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.65■□□□□ 0.26
SNAI2O43623 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNAI2O43623 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNAI2O43623 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNAI2O43623 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
SNAI2O43623 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SNAI2O43623 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.64■□□□□ 0.25
SNAI2O43623 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNAI2O43623 GUSBP5-202ENST00000510805 1989 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms