Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD4Q9H0A8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD4Q9H0A8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD4Q9H0A8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.88■□□□□ 0.77
COMMD4Q9H0A8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COMMD4Q9H0A8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD4Q9H0A8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD4Q9H0A8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 AC011551.1-201ENST00000614101 683 ntBASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 ALDH1A3-203ENST00000557963 1670 ntBASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD4Q9H0A8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD4Q9H0A8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 DUX4L9-201ENST00000449051 1259 ntBASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
COMMD4Q9H0A8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 RARRES2P2-201ENST00000394842 485 ntBASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 LONRF2P2-201ENST00000439212 571 ntBASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD4Q9H0A8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 EP400NL-214ENST00000641289 2402 ntBASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 HSD17B1P1-201ENST00000590052 955 ntBASIC19.83■□□□□ 0.77
COMMD4Q9H0A8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD4Q9H0A8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD4Q9H0A8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD4Q9H0A8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COMMD4Q9H0A8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
COMMD4Q9H0A8 GUSBP5-202ENST00000510805 1989 ntBASIC19.83■□□□□ 0.76
COMMD4Q9H0A8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD4Q9H0A8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD4Q9H0A8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 CLDN5-201ENST00000403084 2357 ntBASIC19.81■□□□□ 0.76
COMMD4Q9H0A8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms