Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.778e-7■■■■■ 38.4
DKC1O60832 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.546e-12■■■■■ 38.3
DKC1O60832 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.9■■□□□ 1.97e-7■■■■■ 38.3
DKC1O60832 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.447e-7■■■■■ 38.3
DKC1O60832 TOP1MT-206ENST00000518951 1461 ntTSL 523.48■■□□□ 1.357e-7■■■■■ 38.3
DKC1O60832 TOP1MT-207ENST00000519139 1561 ntTSL 520.9■□□□□ 0.947e-7■■■■■ 38.3
DKC1O60832 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.16■□□□□ 0.827e-7■■■■■ 38.3
DKC1O60832 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC14.47□□□□□ -0.097e-7■■■■■ 38.3
DKC1O60832 GAS5-215ENST00000442067 1114 ntTSL 25.65□□□□□ -1.56e-48■■■■■ 38.3
DKC1O60832 GAS5-205ENST00000422008 497 ntTSL 35.34□□□□□ -1.556e-48■■■■■ 38.3
DKC1O60832 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.131e-6■■■■■ 38.2
DKC1O60832 PRKCD-204ENST00000477794 404 ntTSL 320.93■□□□□ 0.941e-6■■■■■ 38.2
DKC1O60832 PRKCD-206ENST00000487897 562 ntTSL 419■□□□□ 0.631e-6■■■■■ 38.2
DKC1O60832 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.451e-6■■■■■ 38.2
DKC1O60832 PRKCD-205ENST00000478843 589 ntTSL 410.62□□□□□ -0.711e-6■■■■■ 38.2
DKC1O60832 SHANK2-214ENST00000468619 2775 ntTSL 214□□□□□ -0.175e-7■■■■■ 38.1
DKC1O60832 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.71□□□□□ -1.187e-9■■■■■ 38.1
DKC1O60832 PPARGC1A-209ENST00000509702 2704 ntTSL 56.77□□□□□ -1.337e-9■■■■■ 38.1
DKC1O60832 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.447e-9■■■■■ 38.1
DKC1O60832 SEPT9-227ENST00000590059 670 ntTSL 523.54■■□□□ 1.365e-7■■■■■ 38.1
DKC1O60832 SEPT9-245ENST00000592481 1291 ntTSL 523.36■■□□□ 1.335e-7■■■■■ 38.1
DKC1O60832 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.895e-7■■■■■ 38.1
DKC1O60832 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.885e-7■■■■■ 38.1
DKC1O60832 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.75■□□□□ 0.755e-7■■■■■ 38.1
DKC1O60832 SEPT9-215ENST00000586521 601 ntTSL 419.62■□□□□ 0.735e-7■■■■■ 38.1
DKC1O60832 SEPT9-221ENST00000588958 879 ntTSL 218.39■□□□□ 0.535e-7■■■■■ 38.1
DKC1O60832 SEPT9-226ENST00000589920 580 ntTSL 217.19■□□□□ 0.345e-7■■■■■ 38.1
DKC1O60832 SEPT9-210ENST00000585929 906 ntTSL 417.01■□□□□ 0.315e-7■■■■■ 38.1
DKC1O60832 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.56■□□□□ 0.245e-7■■■■■ 38.1
DKC1O60832 SEPT9-212ENST00000586128 752 ntTSL 415.57■□□□□ 0.085e-7■■■■■ 38.1
DKC1O60832 SEPT9-209ENST00000585638 565 ntTSL 415.36■□□□□ 0.055e-7■■■■■ 38.1
DKC1O60832 SEPT9-213ENST00000586433 569 ntTSL 413.77□□□□□ -0.215e-7■■■■■ 38.1
DKC1O60832 SEPT9-238ENST00000591472 555 ntTSL 413.46□□□□□ -0.255e-7■■■■■ 38.1
DKC1O60832 SEPT9-239ENST00000591704 749 ntTSL 213.13□□□□□ -0.315e-7■■■■■ 38.1
DKC1O60832 SEPT9-247ENST00000593189 817 ntTSL 512.72□□□□□ -0.375e-7■■■■■ 38.1
DKC1O60832 SEPT9-235ENST00000591020 582 ntTSL 412.5□□□□□ -0.415e-7■■■■■ 38.1
DKC1O60832 SEPT9-234ENST00000590938 611 ntTSL 411.49□□□□□ -0.575e-7■■■■■ 38.1
DKC1O60832 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.67□□□□□ -1.52e-8■■■■■ 38.1
DKC1O60832 TUBGCP6-208ENST00000498611 5274 ntTSL 1 (best)19.7■□□□□ 0.741e-6■■■■■ 38
DKC1O60832 TUBGCP6-203ENST00000434349 830 ntTSL 518.62■□□□□ 0.571e-6■■■■■ 38
DKC1O60832 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.59■□□□□ 0.571e-6■■■■■ 38
DKC1O60832 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.011e-6■■■■■ 38
DKC1O60832 PDXK-206ENST00000398085 796 ntTSL 324.41■■□□□ 1.57e-8■■■■■ 38
DKC1O60832 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15□□□□□ -0.017e-8■■■■■ 38
DKC1O60832 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.37e-8■■■■■ 38
DKC1O60832 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■■■ 37.9
DKC1O60832 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.934e-21■■■■■ 37.9
DKC1O60832 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.524e-21■■■■■ 37.9
DKC1O60832 RFC4-203ENST00000411792 560 ntTSL 520.54■□□□□ 0.889e-38■■■■■ 37.8
DKC1O60832 RFC4-206ENST00000427785 485 ntTSL 313.41□□□□□ -0.269e-38■■■■■ 37.8
DKC1O60832 RFC4-208ENST00000447345 785 ntTSL 213.35□□□□□ -0.279e-38■■■■■ 37.8
DKC1O60832 RFC4-202ENST00000392481 1448 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.289e-38■■■■■ 37.8
DKC1O60832 RFC4-214ENST00000494047 1393 ntTSL 212.43□□□□□ -0.429e-38■■■■■ 37.8
DKC1O60832 RFC4-201ENST00000296273 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.529e-38■■■■■ 37.8
DKC1O60832 RFC4-210ENST00000449502 799 ntTSL 310.82□□□□□ -0.689e-38■■■■■ 37.8
DKC1O60832 RFC4-205ENST00000418288 701 ntTSL 24.97□□□□□ -1.619e-38■■■■■ 37.8
DKC1O60832 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.96■□□□□ 0.632e-8■■■■■ 37.7
DKC1O60832 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.38■□□□□ 0.532e-12■■■■■ 37.7
DKC1O60832 OSBPL2-209ENST00000620616 2099 ntTSL 519.68■□□□□ 0.747e-9■■■■■ 37.7
DKC1O60832 SNHG11-213ENST00000453698 1322 ntTSL 519.72■□□□□ 0.755e-81■■■■■ 37.7
DKC1O60832 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.46■□□□□ 0.715e-81■■■■■ 37.7
DKC1O60832 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.46■□□□□ 0.715e-81■■■■■ 37.7
DKC1O60832 SNHG11-215ENST00000483342 1509 ntTSL 1 (best)19■□□□□ 0.635e-81■■■■■ 37.7
DKC1O60832 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19■□□□□ 0.635e-81■■■■■ 37.7
DKC1O60832 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.26■□□□□ 0.515e-81■■■■■ 37.7
DKC1O60832 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.2■□□□□ 0.55e-81■■■■■ 37.7
DKC1O60832 SNHG11-208ENST00000437028 1169 ntTSL 317.33■□□□□ 0.365e-81■■■■■ 37.7
DKC1O60832 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.24■□□□□ 0.355e-81■■■■■ 37.7
DKC1O60832 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.23■□□□□ 0.355e-81■■■■■ 37.7
DKC1O60832 SNHG11-202ENST00000400436 2652 ntTSL 216.31■□□□□ 0.25e-81■■■■■ 37.7
DKC1O60832 SNHG11-210ENST00000442419 741 ntTSL 312.92□□□□□ -0.345e-81■■■■■ 37.7
DKC1O60832 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC12.36□□□□□ -0.435e-81■■■■■ 37.7
DKC1O60832 SHANK2-213ENST00000460048 736 ntTSL 518.5■□□□□ 0.554e-7■■■■■ 37.6
DKC1O60832 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.276e-7■■■■■ 37.6
DKC1O60832 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.037e-7■■■■■ 37.6
DKC1O60832 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.267e-7■■■■■ 37.6
DKC1O60832 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.41■■□□□ 1.343e-8■■■■■ 37.6
DKC1O60832 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.6■■□□□ 1.053e-8■■■■■ 37.6
DKC1O60832 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.911e-15■■■■■ 37.6
DKC1O60832 TMEM175-219ENST00000515492 784 ntTSL 520.04■□□□□ 0.83e-8■■■■■ 37.6
DKC1O60832 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.83e-8■■■■■ 37.6
DKC1O60832 TMEM175-217ENST00000514453 683 ntTSL 519.83■□□□□ 0.773e-8■■■■■ 37.6
DKC1O60832 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.693e-8■■■■■ 37.6
DKC1O60832 TMEM175-221ENST00000515876 1007 ntTSL 1 (best)18.87■□□□□ 0.613e-8■■■■■ 37.6
DKC1O60832 TMEM175-216ENST00000513952 2084 ntTSL 1 (best)17.68■□□□□ 0.423e-8■■■■■ 37.6
DKC1O60832 TMEM175-214ENST00000510493 1006 ntTSL 517.36■□□□□ 0.373e-8■■■■■ 37.6
DKC1O60832 TMEM175-213ENST00000509508 621 ntTSL 317.36■□□□□ 0.373e-8■■■■■ 37.6
DKC1O60832 TMEM175-202ENST00000438836 2236 ntTSL 216.82■□□□□ 0.283e-8■■■■■ 37.6
DKC1O60832 TMEM175-203ENST00000452360 2011 ntTSL 216.25■□□□□ 0.193e-8■■■■■ 37.6
DKC1O60832 GALNT2-205ENST00000494106 692 ntTSL 515.35■□□□□ 0.051e-15■■■■■ 37.6
DKC1O60832 TMEM175-205ENST00000504180 673 ntTSL 511.89□□□□□ -0.513e-8■■■■■ 37.6
DKC1O60832 ZNF345-203ENST00000432005 585 ntTSL 211.78□□□□□ -0.524e-7■■■■■ 37.6
DKC1O60832 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.784e-7■■■■■ 37.6
DKC1O60832 TMEM175-210ENST00000506669 292 ntTSL 59.35□□□□□ -0.913e-8■■■■■ 37.6
DKC1O60832 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.964e-7■■■■■ 37.6
DKC1O60832 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC9.02□□□□□ -0.974e-7■■■■■ 37.6
DKC1O60832 ZNF345-212ENST00000586933 571 ntTSL 48.71□□□□□ -1.024e-7■■■■■ 37.6
DKC1O60832 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.424e-7■■■■■ 37.6
DKC1O60832 ZNF345-208ENST00000532141 581 ntTSL 35.9□□□□□ -1.464e-7■■■■■ 37.6
DKC1O60832 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.584e-7■■■■■ 37.6
Retrieved 100 of 8,567 protein–RNA pairs in 137.6 ms