RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 MYT1Q01538 1121 aa20.73■□□□□ 0.91
SHANK2-218ENST00000601538 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
SHANK2-218ENST00000601538 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.69
SHANK2-218ENST00000601538 TTBK1Q5TCY1 1321 aaPredicted RBP19.32■□□□□ 0.68
SHANK2-218ENST00000601538 ERICH6Q7L0X2 663 aa19.22■□□□□ 0.67
SHANK2-218ENST00000601538 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
SHANK2-218ENST00000601538 CENPBP07199 599 aaPredicted RBP19.01■□□□□ 0.63
SHANK2-218ENST00000601538 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
SHANK2-218ENST00000601538 YTHDC1Q96MU7 727 aaKnown RBP18.77■□□□□ 0.59
SHANK2-218ENST00000601538 NISCHQ9Y2I1 1504 aa18.7■□□□□ 0.58
SHANK2-218ENST00000601538 APLP2Q06481 763 aa18.68■□□□□ 0.58
SHANK2-218ENST00000601538 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
SHANK2-218ENST00000601538 NEFLP07196 543 aa18.56■□□□□ 0.56
SHANK2-218ENST00000601538 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-218ENST00000601538 DAXXQ9UER7 740 aaPredicted RBP18.27■□□□□ 0.52
SHANK2-218ENST00000601538 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
SHANK2-218ENST00000601538 HRCP23327 699 aa18.18■□□□□ 0.5
SHANK2-218ENST00000601538 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
SHANK2-218ENST00000601538 CLSPNQ9HAW4 1339 aa17.97■□□□□ 0.47
SHANK2-218ENST00000601538 RTL5Q5HYW3 569 aaPredicted RBP17.95■□□□□ 0.46
SHANK2-218ENST00000601538 SHROOM4Q9ULL8 1493 aa17.92■□□□□ 0.46
SHANK2-218ENST00000601538 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
SHANK2-218ENST00000601538 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
SHANK2-218ENST00000601538 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
SHANK2-218ENST00000601538 GLIPR1L2Q4G1C9 344 aa17.57■□□□□ 0.4
SHANK2-218ENST00000601538 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
SHANK2-218ENST00000601538 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
SHANK2-218ENST00000601538 ATP1B4Q9UN42 357 aaPredicted RBP17.35■□□□□ 0.37
SHANK2-218ENST00000601538 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
SHANK2-218ENST00000601538 DIEXFQ68CQ4 756 aaKnown RBP17.24■□□□□ 0.35
SHANK2-218ENST00000601538 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
SHANK2-218ENST00000601538 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
SHANK2-218ENST00000601538 RANGAP1P46060 587 aaPredicted RBP17.22■□□□□ 0.35
SHANK2-218ENST00000601538 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
SHANK2-218ENST00000601538 ANP32BQ92688 251 aaKnown RBP17.17■□□□□ 0.34
SHANK2-218ENST00000601538 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
SHANK2-218ENST00000601538 ANP32AP39687 249 aaKnown RBP17.1■□□□□ 0.33
SHANK2-218ENST00000601538 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-218ENST00000601538 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
SHANK2-218ENST00000601538 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
SHANK2-218ENST00000601538 ANP32CO43423 234 aa16.86■□□□□ 0.29
SHANK2-218ENST00000601538 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
SHANK2-218ENST00000601538 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
SHANK2-218ENST00000601538 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
SHANK2-218ENST00000601538 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.27
SHANK2-218ENST00000601538 ITGAEP38570 1179 aa16.77■□□□□ 0.27
SHANK2-218ENST00000601538 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
SHANK2-218ENST00000601538 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
SHANK2-218ENST00000601538 NEFMP07197 916 aa16.73■□□□□ 0.27
SHANK2-218ENST00000601538 BCANQ96GW7 911 aa16.73■□□□□ 0.27
SHANK2-218ENST00000601538 HSP90AA1P07900 732 aaKnown RBP16.73■□□□□ 0.27
SHANK2-218ENST00000601538 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
SHANK2-218ENST00000601538 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
SHANK2-218ENST00000601538 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
SHANK2-218ENST00000601538 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-218ENST00000601538 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
SHANK2-218ENST00000601538 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
SHANK2-218ENST00000601538 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
SHANK2-218ENST00000601538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-218ENST00000601538 TRIM44Q96DX7 344 aaPredicted RBP16.56■□□□□ 0.24
SHANK2-218ENST00000601538 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.24
SHANK2-218ENST00000601538 CDK11BP21127 795 aaKnown RBP16.46■□□□□ 0.23
SHANK2-218ENST00000601538 NEUROD1Q13562 356 aa16.42■□□□□ 0.22
SHANK2-218ENST00000601538 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
SHANK2-218ENST00000601538 NBR1Q14596 966 aa16.39■□□□□ 0.21
SHANK2-218ENST00000601538 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
SHANK2-218ENST00000601538 DDRGK1Q96HY6 314 aa16.39■□□□□ 0.21
SHANK2-218ENST00000601538 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
SHANK2-218ENST00000601538 BECN1Q14457 450 aa16.36■□□□□ 0.21
SHANK2-218ENST00000601538 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
SHANK2-218ENST00000601538 FKBP8Q14318 412 aa16.34■□□□□ 0.21
SHANK2-218ENST00000601538 GOLGA6L22H0YM25 854 aa16.33■□□□□ 0.2
SHANK2-218ENST00000601538 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
SHANK2-218ENST00000601538 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
SHANK2-218ENST00000601538 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-218ENST00000601538 ARID4BQ4LE39 1312 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-218ENST00000601538 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
SHANK2-218ENST00000601538 DNTTIP2Q5QJE6 756 aaKnown RBP16.17■□□□□ 0.18
SHANK2-218ENST00000601538 ARXQ96QS3 562 aa16.17■□□□□ 0.18
SHANK2-218ENST00000601538 MYH16Q9H6N6 1097 aa16.16■□□□□ 0.18
SHANK2-218ENST00000601538 HNRNPUQ00839 825 aaKnown RBP eCLIP16.16■□□□□ 0.18
SHANK2-218ENST00000601538 PTMAP06454 111 aaKnown RBP16.15■□□□□ 0.18
SHANK2-218ENST00000601538 ZRSR1Q15695 479 aaKnown RBP16.15■□□□□ 0.18
SHANK2-218ENST00000601538 NAP1L5Q96NT1 182 aaPredicted RBP16.14■□□□□ 0.17
SHANK2-218ENST00000601538 GOLGA6L6A8MZA4 724 aa16.13■□□□□ 0.17
SHANK2-218ENST00000601538 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
SHANK2-218ENST00000601538 CHAF1AQ13111 956 aaPredicted RBP16.12■□□□□ 0.17
SHANK2-218ENST00000601538 NRDCO43847 1150 aa16.1■□□□□ 0.17
SHANK2-218ENST00000601538 TONSLQ96HA7 1378 aa16.08■□□□□ 0.17
SHANK2-218ENST00000601538 USP35Q9P2H5 1018 aa16.07■□□□□ 0.16
SHANK2-218ENST00000601538 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
SHANK2-218ENST00000601538 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
SHANK2-218ENST00000601538 CASC1Q6TDU7 716 aa16.02■□□□□ 0.16
SHANK2-218ENST00000601538 TMC1Q8TDI8 760 aa16.01■□□□□ 0.15
SHANK2-218ENST00000601538 DEKP35659 375 aaKnown RBP15.96■□□□□ 0.15
SHANK2-218ENST00000601538 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHANK2-218ENST00000601538 FAM9BQ8IZU0 186 aa15.94■□□□□ 0.14
SHANK2-218ENST00000601538 MSNP26038 577 aaKnown RBP15.94■□□□□ 0.14
SHANK2-218ENST00000601538 PTMSP20962 102 aa15.92■□□□□ 0.14
SHANK2-218ENST00000601538 SUPT16HQ9Y5B9 1047 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms